Search results: Sage Journals

Open accessResearch articleFirst published 2017

CINdex: A Bioconductor Package for Analysis of Chromosome Instability in DNA Copy Number Data

Lei Song, Krithika Bhuvaneshwar, Yue Wang [...]

Cancer Informatics

Open accessBrief reportFirst published 2009

affyPara—a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data

Markus Schmidberger, Esmeralda Vicedo, Ulrich Mansmann

Bioinformatics and Biology Insights

Open accessResearch articleFirst published 2015

A Computational Pipeline for Cross-Species Analysis of RNA-seq Data Using R and Bioconductor

Peter R. LoVerso, Feng Cui

Bioinformatics and Biology Insights

Open accessResearch articleFirst published 2014

OmicCircos: A Simple-to-Use R Package for the Circular Visualization of Multidimensional Omics Data

Ying Hu, Chunhua Yan, Chih-Hao Hsu [...]

Cancer Informatics

Restricted accessResearch articleFirst published March, 2007

Consensus Framework for Exploring Microarray Data Using Multiple Clustering Methods

Ted Laderas, Shannon McWeeney

OMICS: A Journal of Integrative Biology

Restricted accessReview articleFirst published June, 2007

Book review: Gentleman R,Huber W,Carey VJ,Irizarry RA,Dudoit S 2005: Bioinformatics and Computational Biology Solutions Using R and Bioconductor. New York: Springer,473 p. 128 illus. (HB). ISBN 0 387 25146 4

Paul Hewson

Statistical Methods in Medical Research

Restricted accessResearch articleFirst published February, 2013

GeneExpressionSignature: an R package for discovering functional connections using gene expression signatures

Fei Li, Yang Cao, Lu Han [...]

OMICS: A Journal of Integrative Biology

Open accessResearch articleFirst published May, 2023

IntOMICS: A Bayesian Framework for Reconstructing Regulatory Networks Using Multi-Omics Data

Anna Pačínková, Vlad Popovici

Journal of Computational Biology

Restricted accessResearch articleFirst published May, 2012

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

Guangchuang Yu, Li-Gen Wang, Yanyan Han [...]

OMICS: A Journal of Integrative Biology

Open accessResearch articleFirst published 2020

Thyroid Tumor: Investigating MicroRNA-21 Gene Suppression in FTC and FTA

Martin C Nwadiugwu

Cancer Informatics

Open accessResearch articleFirst published 2017

CINdex: A Bioconductor Package for Analysis of Chromosome Instability in DNA Copy Number Data

Lei Song, Krithika Bhuvaneshwar, Yue Wang [...]

Cancer Informatics

Open accessBrief reportFirst published 2009

affyPara—a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data

Markus Schmidberger, Esmeralda Vicedo, Ulrich Mansmann

Bioinformatics and Biology Insights

Open accessResearch articleFirst published 2015

A Computational Pipeline for Cross-Species Analysis of RNA-seq Data Using R and Bioconductor

Peter R. LoVerso, Feng Cui

Bioinformatics and Biology Insights

Open accessResearch articleFirst published 2014

OmicCircos: A Simple-to-Use R Package for the Circular Visualization of Multidimensional Omics Data

Ying Hu, Chunhua Yan, Chih-Hao Hsu [...]

Cancer Informatics

Restricted accessResearch articleFirst published March, 2007

Consensus Framework for Exploring Microarray Data Using Multiple Clustering Methods

Ted Laderas, Shannon McWeeney

OMICS: A Journal of Integrative Biology

Restricted accessReview articleFirst published June, 2007

Book review: Gentleman R,Huber W,Carey VJ,Irizarry RA,Dudoit S 2005: Bioinformatics and Computational Biology Solutions Using R and Bioconductor. New York: Springer,473 p. 128 illus. (HB). ISBN 0 387 25146 4

Paul Hewson

Statistical Methods in Medical Research

Restricted accessResearch articleFirst published February, 2013

GeneExpressionSignature: an R package for discovering functional connections using gene expression signatures

Fei Li, Yang Cao, Lu Han [...]

OMICS: A Journal of Integrative Biology

Open accessResearch articleFirst published May, 2023

IntOMICS: A Bayesian Framework for Reconstructing Regulatory Networks Using Multi-Omics Data

Anna Pačínková, Vlad Popovici

Journal of Computational Biology

Restricted accessResearch articleFirst published May, 2012

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

Guangchuang Yu, Li-Gen Wang, Yanyan Han [...]

OMICS: A Journal of Integrative Biology

Open accessResearch articleFirst published 2020

Thyroid Tumor: Investigating MicroRNA-21 Gene Suppression in FTC and FTA

Martin C Nwadiugwu

Cancer Informatics