Abstract
The Per2luc mouse model developed by Takahashi laboratory is one of the most powerful models to study circadian rhythms in real time. In this study, we report that photoreceptors degenerate in male Per2luc mice during aging. Young (2.5- to 5-month-old) and aged (11- to 13.5-month-old) homozygous male Per2luc mice and C57BL/6J mice were used for this study. Retina structure and function were investigated via spectral domain optical coherence tomography (SD-OCT), fundus imaging, and electroretinography (ERG). Zonula occludens-1 (ZO-1) immunofluorescence was used to analyze the retinal pigment epithelium (RPE) morphology. Fundus examination revealed no difference between young Per2luc and wild-type (WT) mice. However, the fundus of aged Per2luc mice showed white deposits, suggestive of age-related drusen-like formation or microglia, which were absent in age-matched WT mice. No differences in retinal structure and function were observed between young Per2luc and WT mice. However, with age, Per2luc mice showed a significant reduction in total retinal thickness with respect to C57BL/6J mice. The reduction was mostly confined to the photoreceptor layer. Consistent with these results, we observed a significant decrease in the amplitude of a- and b-waves of the ERG in aged Per2luc mice. Analysis of the RPE morphology revealed that in aged Per2luc mice there was an increase in compactness and eccentricity with a decrease in solidity with respect to the values observed in WT, pointing toward signs of aging in the RPE of Per2luc mice. Our data demonstrate that homozygous Per2luc mice show photoreceptor degeneration during aging and a premature aging of the RPE.
Circadian rhythms regulate key physiological functions in most organs and tissues (Takahashi, 2017). Several studies have also shown that these rhythms contribute to the regulation of retinal functions (Felder-Schmittbuhl et al., 2018; DeVera et al., 2019) and photoreceptor viability during aging (Baba et al., 2018a, 2018b). Earlier investigations have demonstrated that the rodent’s retina contains a circadian clock (Tosini and Menaker, 1996; Tosini and Menaker, 1998; Ruan et al., 2008). The understanding of the circadian organization of the mouse eye has been greatly facilitated by the use of the Per2luc mouse model developed by Takahashi laboratory (Yoo et al., 2004). Using Per2luc mice, several studies have demonstrated that several tissues in the eye (e.g., retina, cornea, and retinal pigment epithelium [RPE]) contain circadian clocks (Ruan et al., 2008; Baba et al., 2010, 2015; Jaeger et al., 2015). These studies have shown that circadian rhythms in the retina and RPE act independently from the master circadian clock located in the brain (Baba et al., 2010), and within the retina, the photoreceptor layer, the inner retinal layer, and the ganglion cell layer all contain functional clocks that drive the circadian rhythm in Per2luc bioluminescence (Jaeger et al., 2015). The entrainment of these circadian clocks is probably mediated by dopamine via dopamine 2 receptors in the RPE (Baba et al., 2017) and dopamine 1 receptors in the retina (Ruan et al., 2008) and by melatonin, via melatonin receptor type 2, in the cornea (Baba et al., 2015). Additional studies have also shown that rod photoreceptors (Calligaro et al., 2019) and ganglion cells expressing OPN5 (Buhr et al., 2015) are responsible for the entrainment of the retinal circadian rhythm.
During the course of these studies on the circadian organization of the mouse retina, we noticed that older homozygous Per2luc mice showed a more pronounced decrease in amplitude of the a- and b-waves of the electroretinogram (ERG) than age-matched C57BL/6J mice, thus suggesting the possibility that the insertion of the Per2luc construct may have a negative effect on retinal cells.
Materials and Methods
Animals
Male C57BL/6J (Jackson laboratory, 000664) and male homozygous Per2luc mice (Yoo et al., 2004; with an in-frame fusion of firefly luciferase to Per2 and an SV40 polyadenylation signal; Jackson laboratory, 006852) were maintained and bred for 50 generations at Morehouse School of Medicine. Mice were maintained under a 12:12 light:dark cycle (300-400 lux during the light phase), and food and water access was ad libitum. Verification of homozygous Per2luc genotype was done as described (Yoo et al., 2004). Per2luc mice were also genotyped to verify the absence of known mutations like rd1 (5′-TAGCCCCAAGCACCTATCTA-3′ and 5′-TGTGCATGTTGGATGTTTTT-3′) and rd8 (Mattapallil et al., 2012) that affect photoreceptor health. The age of all the mice used in following analysis has also been provided in days in the supplemental file (Table S1).
Spectral Domain Optical Coherence Tomography (SD-OCT)
Per2luc and C57BL/6J mice were analyzed for retinal structure using a Micron IV SD-OCT system and a fundus camera (Phoenix Research Labs, Pleasanton, CA) as previously described (Goyal et al., 2020) at ZT6. Briefly, mice were anesthetized with ketamine/xylazine cocktail and kept on Micron IV SD-OCT platform. SD-OCT images were obtained from the left and right eyes after a sharp and clear image of the fundus (with the optic nerve centered) was obtained. SD-OCT was a circular scan about 100 µm from the optic nerve head. Fifty scans from each eye were averaged. The retinal layers (indicated on the figure images) were identified according to the published nomenclature. Total retinal thickness and thickness of the individual retinal layers were analyzed using National Institutes of Health ImageJ (1.51w).
Electroretinogram
Per2luc and C57BL/6J mice were dark-adapted for at least 1 h starting ZT5-ZT6 and anesthetized with ketamine/xylazine mixture. All preparation of ERG recordings was conducted under dim red light (<3 lux, 15W Kodak safe lamp filter 1A; Eastman Kodak, Rochester, NY) as previously described (Goyal et al., 2020), measuring ERG responses at ZT6-ZT7. Briefly, mouse eyes were presented with 7 series of flash intensity from 0.03 to 6.28 cd·s/m2 with intervals of flashes from 0.612 to 30 s. For light-adapted responses (photopic), cone-associated activity was isolated by oversaturating rods with 63 cd·s/m2 of steady white background light. A series of 4 consecutive white flashes (79.06 cd·s/m2) were introduced at 2.5, 5, 10, and 15 min during the background light exposure. The traces of the ERG were averaged and stored on a computer for later analysis. Amplitude of the b-wave was measured from the trough of the a-wave to the peak of the b-wave or from the baseline to the b-wave peak, in case a-wave was not present.
RPE Morphology Analysis
Whole eyes from C57BL/6J and Per2luc mice were enucleated, processed, and immunostained as previously described (Goyal et al., 2020) at ZT6. Briefly, each eye following enucleation was placed in Z-fix (Anatech, 170) for 10 min at room temperature and then rinsed up to 5 times with 0.01 M phosphate-buffered saline. On a clean microscope slide (VWR, 16004-406), radial cuts around the limbus of the eye were made using spring scissors (WPI, 501235) to remove the anterior segment of the eye (cornea and lens). The remaining eye cup was divided into 4 petals and allowed to be flattened against the microscope slide. The now exposed retina was peeled using Dumont #5/45 forceps (FST, 11251-35), and RPE flat mounts were placed in a 24-well plate (Fisher, 12565501) with 0.01 M phosphate-buffered saline and processed immediately for zonula occludens-1 (ZO-1) immunostaining. RPE flat mounts were blocked and then incubated with ZO-1 antibody (1:500; Millipore Sigma, MABT11) overnight at 4 °C. Flat mounts were washed and incubated in Alexa Fluor 488 (1:500, goat anti-rat; Invitrogen, A110006) for up to 2 h on a shaker at room temperature. RPE cell junctions were visualized on a confocal microscope (Zeiss LSM 700) in the 488-nm channel, and autofluorescent particles were visualized in the 568-nm channel. To determine the number of autofluorescent particles per RPE cell, a pipeline in Cell Profiler (v. 2.2.0) was created to (1) identify RPE cells on the isolated RPE flat mount via ZO-1 staining, (2) identify all autofluorescent particles present on the RPE flat mount, (3) create a mask from the ZO-1 labeling to identify RPE cells, and (4) count the number of autofluorescent particles in each RPE cell. In addition, RPE cell morphology parameters such as area, eccentricity, solidity, and compactness were measured from step 1 on isolated RPE cells, as previously described (Boatright et al., 2015; Supplemental S2). For all RPE morphology analyses, only central measurements were made on each RPE petal (up to 1.0 mm from the optic nerve head).
Statistical Analysis
Data were analyzed with t-test or 2-way analysis of variance (ANOVA). Post hoc multiple comparisons of interactions were performed with the Tukey test (GraphPad Prism). Significance level was set at p = 0.05 with a power >0.8. Data are expressed as mean ± standard error of the mean (SEM).
Results
Aging Induces a Decrease in the Photoreceptor Layer Thickness and Functioning in Per2luc Mice
The total retinal thickness and the thickness of different retinal layers were not different between young C57BL/6J and Per2luc mice (Figure 1a; t-test, p > 0.05 in both cases). A significant reduction in total retinal thickness was observed in the older Per2luc mice with respect to age-matched C57BL/6J mice (Figure 1b; t-test, p < 0.05). Among the different retinal layers, the reduction in thickness was most pronounced in the outer nuclear layer and photoreceptor layer of the Per2luc mice (Figure 1c and d; 2-way ANOVA, Tukey post hoc, p < 0.05).

Per2luc mice show a significant reduction in the photoreceptor layer thickness during aging. Measurement of in vivo retinal thickness in both C57BL/6J and Per2luc mice revealed no differences in total retinal thickness in the young mice (a; p > 0.05, t-tests; n = 5-6). When we measure the thickness of different retinal layers, a small difference was observed in NFL-GCL and in INL (c; p > 0.05, 2-way ANOVA, Tukey post hoc, n = 5-6) at 3 months of age. However, at 12 months of age, there was a significant decrease in the total retinal thickness in Per2luc mice compared with age-matched C57BL/6J mice (b; *p < 0.05, t-test, n = 5-6). A small decrease in the thickness of INL was detected in older Per2luc mice (d; *p < 0.05, 2-way ANOVA, Tukey post hoc), and a much more pronounced reduction in the photoreceptor layer (ONL and ISOS) was observed in aged Per2luc mice (d; *p < 0.05, 2-way ANOVA, Tukey post hoc). No significant differences were detected in the other retinal layers (p > 0.05, 2-way ANOVA). Abbreviations: ANOVA = analysis of variance; GCL = ganglionic cell layer; IPL = inner plexiform layer; ISOS = inner segment and outer segment; NFL = nerve fiber layer; ONL = outer plexiform layer; OPL = outer plexiform layer; INL = inner retinal layer (n = 5-6 in all cases).
Consistent with these results, we did not observe any significant differences in a- and b-wave amplitude of scotopic ERGs between the 2 genotypes at younger age (Figure 2; 2-way ANOVA, p > 0.05), whereas a significant reduction in a- and b-wave amplitude of the scotopic ERG was observed in older Per2luc with respect to age-matched C57BL/6J mice (Figure 2; 2-way ANOVA, Tukey post hoc, p < 0.05).

The amplitude of a- and b-waves of the scotopic ERG is reduced in aged Per2luc mice. Assessing photoreceptor function for C57BL/6J and Per2luc mice revealed no difference in scotopic a-wave (a; p > 0.05, 2-way ANOVA, Tukey post hoc, n = 5-6) or b-wave (b; p > 0.05, 2-way ANOVA, Tukey post hoc, n = 5-6) at the younger age. However, with aging, Per2luc mice exhibited decreased photoreceptor function in both the a-wave (c; *p < 0.05, 2-way ANOVA, Tukey post hoc, n = 5-6) and b-wave (d; *p < 0.05, 2-way ANOVA, Tukey post hoc, n = 5-6) compared with similarly aged C57BL/6J mice. Interestingly, the photopic response of both young (e; p > 0.05, 2-way ANOVA, Tukey post hoc, n = 5-8) and old mice (f *p < 0.05, 2-way ANOVA, Tukey post hoc, n = 5-8) had similar cone photoreceptor response in Per2luc compared with similarly aged C57BL/6J mice. Abbreviations: ANOVA = analysis of variance; ERG = electroretinography.
Interestingly, the photopic ERGs did not overtly differ between the 2 genotypes at both ages investigated (Figure 2; 2-way ANOVA, Tukey post hoc, p < 0.05), thus suggesting that cone photoreceptor functioning is not affected by aging in Per2luc mice.
Increased Non-RPE-Specific Autofluorescence in Old Per2luc Mice Eyes
Fundus analysis of the eyes for both C57BL/6J and Per2luc mice at younger age did not exhibit any obvious fundus autofluorescence (Figure 3). However, in old mice, there was an obvious visual difference in the fundus of aged Per2luc mice compared with aged C57BL/6J mice (Figure 3). Using cell profiler, we then measured the total number of apical autofluorescent particles present in isolated RPE cells on a flat mount preparation (Figure 3) in C57BL/6J and Per2luc mice at young and old age. No difference in the total number of apical autofluorescent particles of isolated RPE cells was observed in an RPE flat mount preparation from C57BL/6J or Per2luc mice (Figure 3, p > 0.05, 2-way ANOVA, Tukey post hoc).

Aged Per2luc mice display some abnormality in the fundus, but no difference in RPE cell apical autofluorescence. At the younger age, no differences were observed in the fundus image between the 2 genotypes (a, b), whereas at the older age we observed an increase in the number of fundus autofluorescence spots (white arrows) in Per2luc mice (d) compared with C57BL/6J mice of similar age (c). We then counted the number of apical autofluorescent particles present in isolated RPE cells in RPE flat mount preparation using cell profiler (v. 2.2.0), which allowed the delineation of RPE cells via ZO-1 staining (e) and autofluorescent particles (i.e., lipofuscin) (f). Finally, an RPE cell ZO-1 mask was created, which was then overlaid on the isolated autofluorescent particles (g). When the lipofuscin particles were counted in each isolated RPE cell, there were no differences observed in the number of autofluorescence particles (i; p > 0.05, 2-way ANOVA, Tukey post hoc, n = 3-4). A representative immunofluorescence image of a typical RPE flat mount with ZO-1 and autofluorescent particles from a young C57BL/6J mouse (h). Abbreviations: ANOVA = analysis of variance; RPE = retinal pigment epithelium; ZO = zonula occludens.
Aged Per2luc RPE Cells Exhibited Altered Morphology Parameters
No differences in compactness, eccentricity, and solidity were observed in younger C57BL/6J and Per2luc RPE cells (Figure 4, p > 0.05, 2-way ANOVA). However, there was a slight increase in total RPE cell area in Per2luc mice compared with C57BL/6J mice (Figure 4; p < 0.05, 2-way ANOVA, Tukey post hoc). In the older Per2luc mice, we observed an increase in compactness and eccentricity (Figure 4, p < 0.05, 2-way ANOVA; Tukey post hoc) and a decrease in solidity compared with age-matched C57BL/6J mice (Figure 4; p < 0.05, 2-way ANOVA; Tukey post hoc).

Aged Per2luc mice show signs of premature aging in the RPE. RPE cell shape morphology was assessed in young C57BL/6J (a) and Per2luc (c) mice and old C57BL/6J (b) and Per2luc (d) mice. We observed an increase in total RPE cell area in young Per2luc mice compared with similarly aged C57BL/6J mice (e; *p < 0.05, 2-way ANOVA, Tukey post hoc, n = 3-4) with no change in the other cell morphology parameters measured at this age (f, g, h; p > 0.05, 2-way ANOVA, n = 3-4). However, when these mice were old, there was no longer any difference in total RPE cell area (i; p > 0.05, 2-way ANOVA, n = 3-4), but there was an increase in compactness and eccentricity, and a decrease in solidity compared with age-matched C57BL/6J mice (j, k, l; *p < 0.05, 2-way ANOVA, Tukey post hoc, n = 3-4). Photomicrographs show representative RPE flat mount images of ZO-1 cell junction protein demarcating RPE cell boundaries in C57BL/6J and Per2luc mice at both young and old age. Abbreviations: ANOVA = analysis of variance; RPE = retinal pigment epithelium; ZO = Zonula occludens.
Discussion
The use of the Per2luc mouse model has been an invaluable tool to dissect the mouse circadian system, and we are not aware of any other study that has shown negative effect of this genetic manipulation. The data reported in this study indicate that aged male homozygous Per2luc mice show the following phenotypes: (1) total retina thickness is decreased in Per2luc mice during old age with respect to age-matched controls; (2) this decrease is almost exclusively attributed to reduction in the thickness of the photoreceptor layer; and (3) the RPE of aged Per2luc mice showed clear signs of premature aging.
The photoreceptor layer of the mouse retina is mostly constituted by rod photoreceptors since cones represent only 3% of the photoreceptors (Jeon et al., 1998). Hence, the significant decrease observed in the thickness of photoreceptor layer thickness (about 25%) suggests that rod photoreceptor viability is reduced during the aging process in Per2luc mice. The ERG data further support this finding since only the scotopic ERG (i.e., the response of the rods) is affected in old Per2luc mice, whereas the photopic ERG (i.e., the response of the cones) does not appear to have major deficits in aged Per2luc mice. It is also worth noting that the other retinal layers did not shown any changes, at least as assessed by SD-OCT.
Our data also show that the RPE of the Per2luc mice may show signs of premature aging as indicated by the increase in putative basal autofluorescence bodies present in the fundus image (Figure 3) and in the morphological analysis of the RPE cells (Figure 4).
The fact that no significant differences were found in the analysis of the autofluorescence of the apical surface of the RPE cells (Figure 3), while there were obvious difference in the fundus autofluorescence, can be explained by the fact that the source of fundus autofluorescence observed with fundus imaging is located between the basal surface of the RPE and Bruch’s membrane (see review: Sparrow and Duncker, 2014).
Previous studies have shown that within the retina many cell types (e.g., ganglion, bipolar, amacrine) contain circadian clocks, but the rod photoreceptors are believed to lack the molecular machinery necessary to generate circadian oscillation (Ruan et al., 2006; Liu et al., 2012). Additional studies have suggested that within the photoreceptor layer, only cones seem to harbor a circadian clock (Storch et al., 2007; Liu et al., 2012; Baba et al., 2018a). Thus, it is puzzling that the negative effects of Per2luc are observed in a cell type that probably does not contain a functional circadian clock. On the contrary, the RPE—which contains a functional circadian clock (Baba et al., 2010, 2017)—also showed premature aging in Per2luc homozygous mice. Since the retina and RPE are tightly connected and the health of one depends on the health status of the other (Sparrow et al., 2010), it is plausible to speculate that the reduction in rod photoreceptors may be a consequence of the RPE premature aging in the presence of the Per2luc construct in these cells.
It is worth noting that in our study we have used mice homozygous for Per2luc, whereas the vast majority of the other studies have used Per2luc heterozygous mice. Although we have not performed a systematic analysis, it is worthwhile here to mention that in a preliminary study using mice heterozygous for Per2luc mice, we did not observe any negative retinal phenotype. Thus, we believe that the negative effects observed in our study are only present in homozygous Per2luc, and we suggest—at least for aging studies—not using Per2luc homozygous mice.
It important here to mention that the underlying molecular mechanism responsible for the observed phenomenon is unknown. However, we believe that the effects do not involve dysfunction of the molecular clockwork since other cell types in retina that are known to contain a circadian clock were unaffected. Furthermore, homozygous Per2luc mice do not show any difference in the entrainment to light:dark cycle, free running period, amplitude of circadian rhythms, activity levels, and phase-shifts with respect to C57BL/6J mice or to Per2luc heterozygous mice (Yoo et al., 2004). Therefore, we believe that the identification of the possible mechanism will require a sophisticated analysis at the genomic and proteomic levels, which are beyond the scope of this study. Finally, it is worth mentioning that in our study we only used male mice, and thus it is possible—although we do not believe likely—that female Per2luc homozygous mice may not show the same phenotype that we have observed in male Per2luc homozygous mice.
In conclusion, our studies have shown that male homozygous Per2luc mice show a significant decrease in the thickness of the photoreceptor layer and premature aging of the RPE. However, the mechanisms responsible for such effects are not known, and such understanding will require additional studies focusing on the molecular mechanisms.
Supplemental Material
Supplemental_File1 – Supplemental material for Photoreceptor Degeneration in Homozygous Male Per2luc Mice During Aging
Supplemental material, Supplemental_File1 for Photoreceptor Degeneration in Homozygous Male Per2luc Mice During Aging by Varunika Goyal, Christopher DeVera, Kenkichi Baba, Jana Sellers, Micah A. Chrenek, P. Michael Iuvone and Gianluca Tosini in Journal of Biological Rhythms
Research Data
ZO1_lipo – Photoreceptor Degeneration in Homozygous Male Per2luc Mice During Aging
ZO1_lipo for Photoreceptor Degeneration in Homozygous Male Per2luc Mice During Aging by Varunika Goyal, Christopher DeVera, Kenkichi Baba, Jana Sellers, Micah A. Chrenek, P. Michael Iuvone and Gianluca Tosini in Journal of Biological Rhythms
Footnotes
Acknowledgements
This work was supported by National Institutes of Health Grants: GM116760 to K.B., EY026291 to G.T., and NS083932 to Morehouse School of Medicine; EY004864, EY027711, and EY006360 to P.M.I.; and an unrestricted departmental grant from Research to Prevent Blindness (Emory Department of Ophthalmology). Data are available upon request to the corresponding author.
Conflict of Interest Statement
The author(s) have no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
Notes
References
Supplementary Material
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