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Research article

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Validation of a Mathematical Model of Gene Transcription in Aggregated Cellular Systems: Application to L1 Retrotransposition

Grzegorz A. Rempala, Kenneth S. Ramos, Ted Kalbfleisch [...]

Journal of Computational Biology

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Research article

First published

Computational Modeling of Post-Transcriptional Gene Regulation by MicroRNAs

Raya Khanin, Veronica Vinciotti

Journal of Computational Biology

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Research article

First published 2011-07

Transcriptional Profile of Genes Involved in Oxidative Stress and Antioxidant Defense in a Dietary Murine Model of Steatohepatitis

Agnieszka Gornicka, Gareth Morris-Stiff, Samjhana Thapaliya [...]

Antioxidants & Redox Signaling

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Research article

First published 2012-2

Transcription-Based Oscillator Model for Light-Induced Splitting as Antiphase Circadian Gene Expression in the Suprachiasmatic Nuclei

Sondra Schroder, Erik D. Herzog, István Z. Kiss

Journal of Biological Rhythms

Open access

Research article

First published 2011

Application of Structure Equation Modeling for Inferring a Serial Transcriptional Regulation in Yeast

Sachiyo Aburatani

Gene Regulation and Systems Biology

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Research article

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Timing of Gene Expression Responses to Environmental Changes

Gal Chechik, Daphne Koller

Journal of Computational Biology

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Research article

First published 2020

Inferring Causation in Yeast Gene Association Networks With Kernel Logistic Regression

Amira Al-Aamri, Kamal Taha, Maher Maalouf [...]

Evolutionary Bioinformatics

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Research article

First published 2008-12

At Least Four Distinct Circadian Regulatory Mechanisms Are Required for All Phases of Rhythms in mRNA Amount

Sigrid Jacobshagen, Bruce Kessler, Claire A. Rinehart

Journal of Biological Rhythms

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Research article

First published 2013-01

Targeting Nrf2-Mediated Gene Transcription by Extremely Potent Synthetic Triterpenoids Attenuate Dopaminergic Neurotoxicity in the MPTP Mouse Model of Parkinson's Disease

Navneet Ammal Kaidery, Rebecca Banerjee, Lichuan Yang [...]

Antioxidants & Redox Signaling

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Research article

First published 2004-11

An Organizational Model of Transcription Factor Binding Sites for a Histone Promoter in D. melanogaster

Mack E. Crayton III, Carll E. Ladd, Martin Sommer [...]

In Silico Biology

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