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Articles (43)

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1-10 of 43 results for alignment-free comparison

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Select article: A Geometric Interpretation for Local Alignment-Free Sequence Comparison

Open access

Research article

First published 2013-07

A Geometric Interpretation for Local Alignment-Free Sequence Comparison

Ehsan Behnam, Michael S. Waterman, Andrew D. Smith

Journal of Computational Biology

Select article: SWSPM: A Novel Alignment-Free DNA Comparison Method Based on Signal Processing Approaches

Open access

Research article

First published 2019

SWSPM: A Novel Alignment-Free DNA Comparison Method Based on Signal Processing Approaches

Tomáš Farkaš, Jozef Sitarčík, Broňa Brejová [...]

Evolutionary Bioinformatics

Select article: Local Decoding of Sequences and Alignment-Free Comparison

Retricted access

Research article

First published 2006-10

Local Decoding of Sequences and Alignment-Free Comparison

Gilles Didier, Ivan Laprevotte, Maude Pupin [...]

Journal of Computational Biology

Select article: Alignment-Free Sequence Comparison (II): Theoretical Power of Comparison Statistics

Retricted access

Research article

First published 2010-11

Alignment-Free Sequence Comparison (II): Theoretical Power of Comparison Statistics

Lin Wan, Gesine Reinert, Fengzhu Sun [...]

Journal of Computational Biology

Select article: Alignment-Free Sequence Comparison Based on Next-Generation Sequencing Reads

Retricted access

Research article

First published 2013-02

Alignment-Free Sequence Comparison Based on Next-Generation Sequencing Reads

Kai Song, Jie Ren, Zhiyuan Zhai [...]

Journal of Computational Biology

Select article: Alignment-Free Sequence Comparison (I): Statistics and Power

Open access

Research article

First published 2009-12

Alignment-Free Sequence Comparison (I): Statistics and Power

Gesine Reinert, David Chew, Fengzhu Sun [...]

Journal of Computational Biology

Select article: Pattern-Based Phylogenetic Distance Estimation and Tree Reconstruction

Open access

Research article

First published 2006

Pattern-Based Phylogenetic Distance Estimation and Tree Reconstruction

Michael Höhl, Isidore Rigoutsos, Mark A. Ragan

Evolutionary Bioinformatics

Select article: A Novel Method for Comparative Analysis of DNA Sequences by Ramanujan-Fourier Transform

Retricted access

Research article

First published 2014-12

A Novel Method for Comparative Analysis of DNA Sequences by Ramanujan-Fourier Transform

Changchuan Yin, Xuemeng E. Yin, Jiasong Wang

Journal of Computational Biology

Select article: SWPhylo – A Novel Tool for Phylogenomic Inferences by Comparison of Oligonucleotide Patterns and Integration of Genome-Based and Gene-Based Phylogenetic Trees

Open access

Research article

First published 2018

SWPhylo – A Novel Tool for Phylogenomic Inferences by Comparison of Oligonucleotide Patterns and Integration of Genome-Based and Gene-Based Phylogenetic Trees

Xiaoyu Yu, Oleg N Reva

Evolutionary Bioinformatics

Select article: kmer2vec: A Novel Method for Comparing DNA Sequences by word2vec Embedding

Retricted access

Research article

First published 2022-09

kmer2vec: A Novel Method for Comparing DNA Sequences by word2vec Embedding

Ruohan Ren, Changchuan Yin, Stephen S.-T. Yau

Journal of Computational Biology

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