Abstract
Culture inserts of Transwell type are widely used in laboratories worldwide to model non-cerebral vessels, the blood-brain barrier (BBB), and other blood-tissue barriers, and also for the study of chemotaxis and transmigration. However, the use of inserts can generate plastic waste that has an environmental impact due to their one-off design and massive consumption. Thus, it is important to develop a method that can reduce the utilization of inserts but not affect research efficiency. In this study, we propose using a 1:1 (v:v) mix of 30% hydrogen peroxide and 99% sulfuric acid (“piranha solution’’) to completely remove cell debris and matrix from culture inserts. BBB models with inserts regenerated using piranha solution have barrier properties comparable to those of fresh inserts. We show that piranha solution is an effective reagent and allows for the reuse of Transwell-type inserts for BBB modeling up to 5 times. Therefore, the use of this method greatly reduces the production of laboratory waste and benefits numerous laboratories worldwide.
Keywords
Abbreviations
blood-brain barrier
Dulbecco’s Modified Eagle Medium
fetal bovine serum
Lucifer Yellow
the apparent permeability coefficient
phosphate-buffered saline
polydimethylsiloxane
radioimmunoprecipitation assay
standard error of the mean
transendothelial electrical resistance
Introduction
The blood-brain barrier (BBB) is an interface between the blood and the brain that limits the entry of potentially harmful substances, cells, and pathogens into brain tissue, while also providing delivery of nutrients and removal of waste products [1]. The BBB is primarily composed of microvessels surrounded by astrocytic processes. Endothelial cells line the vessel wall and are directly responsible for the barrier properties. Pericytes, which regulate the vessel lumen, are located around the endothelial cells, surrounded by a basal membrane. Astrocytic processes are adjacent to the endothelial cells and pericytes on the brain side [1].
Given the complexity of studying brain vasculature, the development of in vitro BBB models has been necessary. The first experiments involving in vitro modeling of the BBB were conducted by Cancilla and colleagues in 1980. In these studies, endothelial cells were cultured on a microporous polycarbonate filter [2]. Currently, there are various in vitro BBB models available, which differ in their configuration, cell types used, presence of fluid flow, and other parameters. The diversity of in vitro BBB models is described in several reviews [3–7].
The most widely used “classic” in vitro BBB model is based on the Boyden chamber assay, originally introduced by Boyden for the analysis of leukocyte chemotaxis [8]. The Boyden chamber consists of two medium-filled compartments separated by a microporous membrane: an upper compartment, which can be considered the “blood” side, and a lower compartment, which is the “side of the brain” [9] (Fig. 1). Now this type of culture inserts is widely known under the commercial name “Transwell’’. Membranes are usually made of polycarbonate or polyethylene terephthalate with pore sizes ranging from 0.4 to 8.0μm. A number of different Boyden chamber devices are commercially available and used in BBB models [10]. Among them are Transwells®, ThinCert®, ChemoTx®, Ibidi, and others. Benefits of the models based on the Boyden chamber include ease of use and establishing cultures, moderate scalability, and the ability to quickly and non-destructively quantify barrier integrity by measuring transendothelial electrical resistance (TEER) or permeability coefficient [11, 12]. Cells can be separated and harvested for further study (proteomic and genomic analysis) and are available in a variety of pore sizes and membranes to suit a variety of experimental requirements [13]. Moreover, Transwell inserts are widely used not only for BBB modelling, but also for modeling peripheral microvessels, and other blood-tissue barriers, as well as for studying chemotaxis and transmigration [13].

The blood-brain barrier in vitro model based on Transwell® culture insert.
However, commercial Transwell-type inserts are made for one-time use, are expensive for most laboratories worldwide, and generate plastic waste that can have a negative impact on the environment. Thus, the goal of this study was to provide a method that can reduce the utilization of commercial inserts while not affecting research efficiency.
To date, several reagents have been provided for the regeneration of Transwell-type inserts. Among them are Trypsin-EDTA, 6M urea, and radioimmunoprecipitation assay (RIPA) buffer [14]. Despite their effectiveness in removing cells, they are not able to completely remove collagen coverage, which is widely used in BBB modeling. Therefore, it is necessary to develop a method that would allow for the effective removal of not only cells but also collagen remnants and other debris.
In this study, we propose the use of a 1:1 (v:v) mix of 30% hydrogen peroxide and 99% sulfuric acid (“piranha solution”) to completely remove cell debris and matrix from culture inserts. The result of the mixture of H2O2 and H2SO4 gives rise to a strong oxidizing agent called per-hexa-sulfuric acid (H4SO6) that is used to clean organic residues off substrates [15]. Polycarbonate and polydimethylsiloxane (PDMS) are resistant against strong oxidizing agents; therefore, theoretically, regeneration using this substance should not affect the membrane and holder of the insert [15].
Cell cultures
BEnd.3 endothelial cell line (ATCC® CRL-2299) was cultivated in a full DMEM medium (DMEM medium (PanEco Ltd.) supplemented with 10% FBS (Gibco), GlutaMAX (Gibco) and PenStrep (PanEco Ltd.)), and the medium was changed twice a week. Cells were passaged using a standard trypsinization protocol. The cells were washed with Versene solution (PanEco Ltd.), incubated with a 0.25% trypsin solution (PanEco Ltd.) for 5-10 minutes, suspended in full DMEM to stop the reaction, centrifuged for 5 minutes at 300 g, and then suspended in full DMEM.
Primary astrocytes were obtained as described previously [16]. Briefly, C57BL/6 mice (P4-P6) were decapitated, brains were isolated and washed with cold PBS, olfactory bulbs, cerebella, and brain stem were removed, and the cortices were cut in pieces. Cortices were incubated in TrypLEtrademark Express (Gibco), at 37 C for 30 minutes, and centrifuged for 5 min at 300 x g to pellet cortex pieces. Cortex pieces were dissociated into a single cell suspension by pipetting. The cell suspension was plated in a T-75 culture flask coated with poly-D-lysine at the rate of 4 cortex on the one T-75 flask and cultured in a full DMEM medium. The medium was changed twice a week [14]. Cells were passaged using a standard trypsinization protocol. The cells were washed with Versene solution (PanEco Ltd.), incubated with a 0.25% trypsin solution (PanEco Ltd.) for 5-10 minutes, suspended in full DMEM to stop the reaction, centrifuged for 5 minutes at 300 g, and then suspended in full DMEM.
In vitro BBB model construction
In vitro BBB models were constructed as described previously [17, 18]. The BBB models were constructed using a Corning Transwell culture insert for a 24-well plate with polycarbonate membrane with a pore size of 3μm (Corning® Transwell® Inserts, Corning Incorporated, Corning, NY, USA). Briefly, the apical side of the porous membrane of the insert was coated with collagen I from the rat tail (5 mg/mL) (Gibco). 100μl suspension with 10∧5 of primary murine astrocytes was placed on the lower side of the membrane of the inverted insert and left for 3 hours for attachment. Then the insert was flipped to the normal position and placed in a 24-well culture plate with a full DMEM medium. Then 10∧4 of bEnd.3 cells were seeded on the apical side of the porous membrane. The models were maintained in full DMEM, medium was changed twice a week.
Measurement of barrier properties
The barrier integrity of the in vitro BBB model was evaluated by measurement of permeability for the fluorescent dye Lucifer yellow (LY) [10]. Measurement of permeability for LY is a standard method for evaluating the barrier properties of in vitro BBB models. For permeability analysis, all medium from the upper and lower compartments was aspirated. 200μl of 1 mM LY in PBS was added to the upper chamber of a culture insert. 1 ml of PBS was added to the lower chamber. The culture plate was placed into a CO2 incubator at 37°C for 60 min. Then solutions from the upper and lower compartments were aspirated and the fluorescent signal was measured using Varioskan LUX multimode microplate reader (Thermo Scientifictrademark). The following equation was used to calculate the apparent permeability coefficient (P): Vb –a volume of lower compartment, sm3 (1 sm3) A –an area of the porous membrane, sm2 (0,33 sm2) Cao –the initial intensity of fluorescence of added LY solution ΔCB –change of fluorescence in the lower compartment Δt –time of incubation, min (60 min).
Fluorescence of the PBS solution was considered as background and was subtracted from Cao and ΔCB values.
Regeneration of transwell inserts
All manipulations with hydrogen peroxide and sulfuric acid were carried out in a fume hood, following general safety precautions for working with corrosive and toxic substances. A 100 mL glass chemical beaker was used to add 25 mL of 30% hydrogen peroxide, followed by 25 mL of 99% sulfuric acid. Do not use a smaller container or pour a larger volume of liquid, as gasses will be released during the reaction, which can cause liquid splattering. The used inserts were immediately immersed in the beaker using tweezers, ensuring that they were fully submerged in the solution. The inserts were left in the piranha solution until the active gas release ceased, which usually took 5–10 minutes. When the piranha solution interacts with organic substances, heat is released, so it is not recommended to touch the beaker with bare hands to avoid burns. After 5–10 minutes, the inserts were removed from the beaker using tweezers and rinsed three times in sterile distilled water (ddH2O). They were then left in sterile ddH2O for 10–15 minutes to completely remove any residue of the piranha solution. Further manipulations were carried out under sterile conditions using a laminar flow hood. To sterilize the inserts, they were left in 70% ethanol for at least one hour and then rinsed twice in sterile ddH2O. Before further use, it was important to check the inserts under a microscope for any breaks in the membrane.
Cell viability assay
To test the potential influence of insert regeneration on cell viability, staining with Trypan Blue solution (0.4%) was used. The culture inserts with growing cells were washed with Versene solution, then incubated with trypsin solution (0.25%) (1 mL in the lower compartment and 200μL in the upper compartment). The cells were then collected from both compartments, centrifuged, suspended in 100μL of PBS and stained with Trypan Blue. Cells collected from the lower compartment were astrocytes detached from the bottom side of the membrane. Cells from the upper compartment were endothelial cells that grew on the top side of the membrane. Cell counting was performed using a Countesstrademark Automated Cell Counter.
Statistics
The data were analyzed using Prism GraphPad software with a 1-way ANOVA and Bonferroni’s multiple comparisons test. The difference between means was considered statistically significant when p < 0.05. The data are expressed as the mean±SEM (Standard Error of the Mean).
Results
First, we examined the membranes of new inserts, used non-regenerated inserts, and used regenerated inserts under an inverted microscope (Fig. 2). Used non-regenerated inserts showed remnants of collagen coating and cellular debris. New and regenerated inserts did not differ in appearance.

Membrane of a culture insert under an inverted microscope: (a) Membrane of a new insert, (b) Membrane of a used non-regenerated insert, (c) Membrane of a used regenerated insert, (d) Torn membrane, unsuitable for constructing a model. Scale bar –150μm.
To determine the impact of piranha solution treatment on the barrier properties of BBB models and the culture inserts themselves, we measured the permeability coefficient for the fluorescent dye Lucifer Yellow. We measured the barrier properties for new inserts as well as after 1-7 regeneration cycles. Inserts with visible membrane damage under the microscope were not used. It is worth noting that after each regeneration cycle, approximately 10% of the membranes were damaged (Fig. 2). The permeability of both the model inserts and the empty inserts coated only with collagen did not change compared to the new inserts until the fifth regeneration cycle. However, starting from the sixth cycle, statistically significant differences were observed in both the empty inserts and the BBB models (Fig. 3). Therefore, up to 5 regeneration cycles, there is no statistically significant difference in the permeability coefficient for both the empty insert and the BBB model constructed on it.

Permeability coefficient at different regeneration cycles a) for an empty insert b) for a model at the 10th day of cultivation. The data are expressed as the mean±SEM. Comparison with new inserts. Asterisks indicate level of statistical significance: * p≤0.05, N = 5.
To test whether the regeneration of cultured inserts using Piranha solution affects cell viability, the proportion of dead cells was determined by staining with Trypan Blue. Analysis did not reveal any differences in the proportion of dead cells when cultured on new or regenerated Transwells. The proportion of dead endothelial cells was higher than that of dead astrocytes. This can be explained by the fact that dead astrocytes are more effectively removed during medium changes, while dead endothelial cells mostly remain in the upper compartment, which cannot be completely removed to avoid mechanical damage to the membrane (Fig. 4). Thus, it can be concluded that the regeneration of Transwells using Piranha solution does not affect the viability of cells in the BBB model.

Effect of culture insert regeneration on cell viability. The data are expressed as the mean±SEM. Comparison with new inserts. There are no differences in the proportion of dead bEnd.3 endothelial cells and astrocytes when cultured on new or regenerated Transwells.
We have proposed a simple and reliable method for regenerating Transwell culture inserts with polycarbonate membrane. The method involves treating the inserts with a piranha solution, which completely removes organic residues, including the collagen coating that is difficult to remove with other methods. We used the inserts for constructing BBB models, but our protocol can also be applied to other uses of these inserts - for instance, this method potentially allows reuse Transwells after chemotaxis and transmigration assays. We found that up to 5 regeneration cycles, there were no statistically significant differences in the barrier functions of the BBB models compared to new inserts. However, after the 6th cycle, the barrier properties started to deteriorate. This could be due to two reasons. Firstly, the insert material is weak but still subjected to the piranha treatment. And secondly, it could be related to mechanical damage to the membrane during insert manipulation. We noticed that the manipulation of the inserts themselves (using tweezers) can cause membrane breaks, most commonly at the attachment site to the holder. Thus, it can be hypothesized that the increased permeability of BBB models during regeneration cycles is not solely due to the piranha solution treatment, but rather due to the mechanical properties of the insert itself. When using a regenerated insert, it is essential to check its membraneintegrity under a microscope.
In summary, Transwell culture inserts with polycarbonate membranes can be reused up to 5 times after cell and collagen coating removal with piranha solution. The use of this method greatly reduces the production of laboratory waste and benefits numerous laboratories worldwide.
Footnotes
Acknowledgments
This research was funded by the Russian Science Foundation (RSF), grant number 23-75-30023. We also thank Professor Vsevolod Belousov for his comprehensive support of this work.
Author contributions
M.S. conceived and designed the experiments; M.S. performed the experiments; M.S. analyzed the data; G.N. contributed reagents/materials/analysis tools; M.S. wrote the paper.
Conflicts of interest
The authors declare no conflict of interest.
