Abstract
Telomeres at the ends of linear chromosomes protect the genome. Telomeres shorten with each round of cell division, placing a finite limit on cell growth. Telomere attrition is associated with cell senescence and apoptosis. Telomerase, a specialized ribonucleoprotein complex, maintains telomeres homeostasis through repeat addition of telomere sequences to the 3′ telomeric overhang. Telomere biology is closely related to cancer and normal aging. Upregulation of telomerase or activation of the alternative pathway of telomere lengthening is a hallmark of cancer cells, making telomerase an attractive target for cancer therapeutics. In this review, we will discuss telomere biology and the prognostic implications of telomere length in acute myeloid leukemia, and review exciting new investigational approaches using telomerase inhibitors in acute myeloid leukemia and other myeloid malignancies.
Keywords
Introduction
Telomeres cap the terminal ends of chromosomes. They are composed of tandem repeats of the noncoding DNA sequence (5′-TTAGGG-3′), ending in a 3′ single-stranded overhang that is associated with bound proteins [O’Sullivan and Karlseder, 2010]. These proteins form a complex called Shelterin that protects 3′ chromosome ends from recognition as double-strand breaks, preventing inadvertent activation of DNA damage response pathways [de Lange, 2009]. Telomeres shorten with each cell division, which eventually triggers senescence, resulting in growth arrest. Cells can occasionally overcome critically short telomere length (TL) (‘telomeric crisis’) through the activation of telomere maintenance mechanisms. Telomere attrition can be viewed as protective. Accumulation of critically short and dysfunctional telomeres, which are recognized by the cell as double-stranded breaks, triggers DNA damage response pathways [particularly the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia and Rad3 (ATR) kinases pathways] that halt cell proliferation and induce growth arrest or cell death [Maciejowski and de Lange, 2017]. However, critical loss of telomeric DNA in hematopoietic stem cells is also associated with genomic instability and cytogenetic abnormalities, such as the gain or loss of chromosomes and nonreciprocal translocations [Swiggers et al. 2006]. It is not clear why some cells appropriately undergo programmed cell death or senescence, while others become malignant in the face of telomere crisis. Possible explanations include the ability of the cell to maintain some degree of TL, or a dysfunctional or mutant p53 pathway that both contributes to and allows genomic instability to propagate. In patients with myeloid malignancies, those with complex cytogenetic abnormalities/aneuploidy are known to have shorter TL than those with a normal karyotype [Hartmann et al. 2005].
Telomere shortening can be counteracted by activation of telomerase [Collins et al. 1995], a process that can also be exploited by neoplastic cells. The telomerase enzymatic subunit, encoded by telomerase reverse transcriptase (
Perturbations of telomere homeostasis are clearly implicated in the pathogenesis of myeloid disorders, including aplastic anemia, myelodysplastic syndrome (MDS), myeloproliferative neoplasms (MPNs), and acute myeloid leukemia (AML). Herein, we focus on telomere biology in AML. We examine predisposing factors to short TL and associations with leukemogenesis. Current methods for quantifying TL are also discussed. We assess the relationship between TL and molecular genetic abnormalities, prognosis, and treatment in AML patients. Finally, we describe several novel clinical trials examining telomerase inhibitors in various myeloid malignancies (MPNs and MDS) that may ultimately lead to trials in AML as well.
Telomere and telomerase biology
Telomeres are highly conserved in structure and function across species. Telomere function depends on three factors: (a) Telomeric DNA, (b) Shelterin complex, and (c) Telomerase complex (Figure 1). Telomeric DNA is composed of tandem repeats of the sequence 5′-TTAGGG-3′, and includes a double-strand tract of repeats many kilobases long, and a 3′ single-stranded G-rich overhang, measuring a few hundred nucleotides [Maciejowski and de Lange, 2017]. Shelterin is a six-subunit protein complex (comprising TRF1, TRF2, POT1, TPP1, TIN2 and Rap1) that associates specifically with mammalian telomeres and allows cells to distinguish the natural ends of chromosomes from sites of DNA damage (Figure 1). In addition, shelterin protects telomeric DNA from several DNA double-strand break pathways, including the nonhomologous end-joining (NHEJ) pathway that could lead to chromosome end fusions. It protects telomeres by forming the t-loop structure that conceals telomere ends. T-loops are formed through 3′-single-stranded overhang invasions into double-stranded telomeric DNA. TRF1, TRF2, and POT1 of the shelterin complex directly recognize and bind to TTAGGG repeats (POT1 binds to single-stranded repeats), whereas the other proteins, TIN2, TPP1 and Rap1 interconnect the telomere-binding proteins to form the entire complex.

Structure of human telomere system.
Telomeres shorten with each cell division since telomeres cannot be fully duplicated during cell division due to the ‘end replication problem’ [Levy et al. 1992; Olovnikov, 1973; Watson, 1972], whereby lagging strand DNA synthesis cannot be completed all the way to the very end. As subsequent cell divisions lead to critically shortened telomeres (human telomeres shorten by ~50 bps per division), a p53-dependent DNA damage response that triggers cell senescence or apoptosis is elicited [d’Adda di Fagagna et al. 2003]. If cells bypass this pathway and continue to proliferate, extremely short telomeres lose their chromosomal protection, promoting genome instability and leading to either cell death, or potentially, a malignant state.
Telomere attrition can be counteracted by telomerase, which adds TTAGGG repeats to the chromosomal 3′ DNA terminus at the end of chromosomes using an internal RNA template. Telomerase is a ribonucleoprotein enzyme complex consisting of a reverse transcriptase (encoded by
Most human cancers (80–90%) escape telomere crisis by pathologically activating telomerase, one of the hallmarks of cancer allowing replicative immortality [Blackburn et al. 2015; Kim et al. 1994]. The mechanisms underlying reactivation of telomerase in cancer cells are currently being investigated. A small subset of cancer cells extends their telomeres by the alternative lengthening of telomeres (ALT) pathway, which utilizes HR [Bryan et al. 1997].
Current methods for quantifying telomere length
Studies of telomere biology hinge on the measurement of TL in either single cells or, more commonly, populations of cells. TL is a critical variable in deciding cell fate and biologic function, ranging from aging to carcinogenesis, underscoring the need for detection methods that provide accurate information on the length of telomere repeats in different cell types. Multiple methods have been developed for the study of TL [Aubert et al. 2012]. It is often not clear which method is the most appropriate to address a specific research question. Many studies and diagnostic laboratories apply one of the following methods: (a) Terminal restriction fragment (TRF) length analysis, (b) fluorescence
TRF analysis is considered the ‘gold standard’ for quantifying TL, as it directly estimates the average TL in kilobases. In this method, genomic DNA is digested with restriction enzymes, which specifically excise telomeric and subtelomeric repeats. The DNA digest is resolved according to size by agarose gel electrophoresis, and telomere fragments are visualized either by Southern blotting or in-gel hybridization using a labeled probe specific to telomeric DNA. However, TRF analysis has some limitations: it is time consuming, requires large amounts of DNA (micrograms), may be influenced by ‘gel effects’, and includes subtelomeric DNA length in the measurement, thereby often leading to overestimation of true TL [Aubert et al. 2012]. Alternative methods, such as flow-FISH and PCR-based assays, have become important adjuncts to the more laborious TRF analysis and have the advantage of strictly measuring canonical telomeric sequences (i.e. TTAGGG repeats). Flow-FISH is a method that combines fluorescent
Telomere biology in acute myeloid leukemia
Telomere maintenance is particularly important for pluripotent and multipotent stem cells, including hematopoietic stem cells, and it is critical for tissue homeostasis and regeneration. Telomere shortening is among the hallmarks of aging and malignant cells. Once a telomere is critically short, chromosome ends elicit a double-strand-break-like DNA damage response, resulting in growth arrest and cell death. Perturbations of telomere homeostasis have been implicated in the pathogenesis of aplastic anemia, MDS and AML [Scheinberg et al. 2010; Townsley et al. 2015]. Age-adjusted TL appears to be significantly reduced in patients with myeloid malignancies as compared with matched controls [Brümmendorf and Balabanov, 2006]. Telomere shortening in myeloid neoplasms may result from increased replication required for leukemia development or altered telomere regulatory mechanisms. Telomere attrition in hematopoietic cells can lead to genomic instability and cytogenetic abnormalities, such as gain or loss of chromosomes and nonreciprocal translocations. Such genomic instability plays a major role in the initiation of leukemia as indicated by the development of AML after exposure to cytotoxic chemotherapy or ionizing radiation and the 40–50% of AML patients presenting with abnormal cytogenetics [Mrózek et al. 2004]. Telomeres are significantly shorter in leukemia cells with abnormal cytogenetics compared with those with no cytogenetic abnormality, and patients with complex cytogenetics have the shortest telomeres [Capraro et al. 2011]. Shortened TL and increased telomerase activity also correlate with disease progression and relapse [Wang et al. 2010].
There may also be an association between TL and specific mutations and mutation classes in AML patients. In a single institution study, there was a suggestion of increased survival at 6 months in AML patients with longer TL, a difference that diminished over time [Watts et al. 2016]. This trend did not achieve statistical significance, possibly due to limited sample size (
A recent study by Gerbing and colleagues evaluated whether TL can be used as a marker of blood count recovery, given that defects in telomere maintenance are known risk factors for bone marrow failure and aplastic anemia. They hypothesized that short TL could be associated with delayed neutrophil recovery. In this study, bone marrow samples were obtained from pediatric patients with
Mutations in genes encoding components of the telomerase complex result in deficient telomerase function and telomere attrition, predisposing to cancer [Townsley et al. 2015]. The association between constitutional telomerase gene hypomorphic variants and risk of adult AML has been well described. In one study, bone marrow samples from 594 patients with AML were examined for variations in
Most, but not all cancers have relatively short telomeres but high levels of telomerase activity compared with normal cells. In experimental models of AML, telomerase activity is required for leukemia maintenance. Enhanced telomerase activity likely represents an important adaptive mechanism that allows leukemia cells to continue to replicate despite accelerated telomere shortening. Acute leukemia-causing fusion genes MLL-AF4 and AML1-ETO have been reported to upregulate TERT expression [Gessner et al. 2010]. AML is known to originate from small populations of leukemic stem cells (LSCs) that have extensive self-renewing capacity but tend to be resistant to chemotherapy, causing relapse [Bonnet and Dick, 1997; Lapidot et al. 1994]. In a landmark study, the role of telomerase in AML LSC function and maintenance was demonstrated using mice depleted of the RNA component of telomerase (
Telomerase inhibitors in the myeloid malignancies
Clinical efficacy of telomerase inhibition with imetelstat (given as an intravenous infusion) has already been demonstrated in myeloid malignancies such as myelofibrosis (MF) and essential thrombocythemia (ET) (Table 1) [Baerlocher et al. 2015; Tefferi et al. 2015]. A recent multi-institutional phase II trial of imetelstat (7.5 mg/kg or 9.4 mg/kg weekly until platelet count control followed by less frequent maintenance dosing) as second-line therapy in patients with ET showed hematologic responses with platelet-lowering activity in all 18 patients enrolled with a median follow up of 17 months. A total of 89% (16) of those patients had a complete hematologic response [Baerlocher et al. 2015]. Additionally, 88% of patients with a
Completed and ongoing clinical trials of imetelstat in myeloid malignancies.
RARS, refractory anemia with ring sideroblasts; JAK, Janus kinase.
A single-institution pilot phase II study of imetelstat in patients with primary or secondary MF demonstrated complete or partial responses in 7 out of 33 patients enrolled (21%) with a median duration of complete response of 18 months (13 to at least 20) and partial response of 10 months (7 to at least 10) [Tefferi et al. 2015]. For this study, two different dosing schedules were assessed at the 9.4 mg/kg dose level (once every 3 weeks and weekly for four doses followed by once every 3 weeks). Bone marrow fibrosis was reversed in all four patients with complete response. Mutations in genes encoding RNA splicing machinery (i.e.
Treatment-related adverse events on the MF study included grade 4 thrombocytopenia (in 18% of patients), grade 4 neutropenia (in 12%), grade 3 anemia (in 30%), grade 1–2 hyperbilirubinemia (in 12%), grade 1–2 elevated alkaline phosphatase (in 21%), and grade 1–2 elevated aspartate aminotransferase (in 27%). Due to concerns about hepatotoxicity and potential chronic liver injury, the FDA temporarily placed imetelstat clinical trials on a complete hold. However, the FDA has since lifted the clinical hold after the makers of imetelstat showed resolution of liver function abnormalities in 14 of 18 follow-up patients (and improvement in 3 of the other 4) treated on the ET trial. Of note, the ET patients had been treated with higher cumulative doses of imetelstat than those on the MF study.
Imetelstat has also been examined in patients with refractory anemia with ring sideroblasts, with (RARS-T) or without (RARS) thrombocytosis. RARS-T is now termed MDS/MPN with ring sideroblasts and thrombocytosis per the 2016 World Health Organization classification of myeloid malignancies. In MF [Tefferi et al. 2015], clinical and molecular remissions were significantly higher in patients with
In aggregate, these studies have shown encouraging clinical responses. A large international randomized clinical trial (IMbark) including more than 200 patients with MF is currently underway to further study the efficacy and safety of imetelstat in a larger population (Table 1). Correlative studies on this trial will also be essential to better understand the mechanism of action of imetelstat in myeloid malignancies and offer a rationale to expand this therapy into AML. Telomerase-targeted dendritic cell-based vaccine strategies have also been assessed in AML, as a maintenance therapy for patients in remission. This immunotherapy approach was demonstrated to be safe and feasible and to potentially improve recurrence-free survival [Khoury et al. 2017].
Conclusion
Altered telomere homeostasis is clearly relevant to AML pathogenesis and a potential drug target in myeloid malignances. As a biomarker, TL may be associated with survival and specific somatic mutations in AML, such as
Footnotes
Funding
This work was supported by American Society of Hematology HONORS award (AK) and University of Miami Clinical and Translational Science Institute (CTSI) KL2 award (KL2TR000461) (JW).
Conflict of interest statement
The authors declare that there is no conflict of interest.
