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Open access

Research article

First published 2015

Phylogeny Inference of Closely Related Bacterial Genomes: Combining the Features of Both Overlapping Genes and Collinear Genomic Regions

Yan-Cong Zhang, Kui Lin

Evolutionary Bioinformatics

Retricted access

Research article

First published 2011-04

Phylogeny Inference Based on Spectral Graph Clustering

Shu-Bo Zhang, Song-Yu Zhou, Jian-Guo He [...]

Journal of Computational Biology

Retricted access

Research article

First published 2013-11

Inference of Tumor Phylogenies with Improved Somatic Mutation Discovery

Raheleh Salari, Syed Shayon Saleh, Dorna Kashef-Haghighi [...]

Journal of Computational Biology

Retricted access

Research article

First published 2011-03

Generalized Buneman Pruning for Inferring the Most Parsimonious Multi-State Phylogeny

Navodit Misra, Guy Blelloch, R. Ravi [...]

Journal of Computational Biology

Open access

Brief report

First published 2008

Bayesian,Maximum Parsimony and UPGMA Models for Inferring the Phylogenies of Antelopes Using Mitochondrial Markers

Haseeb A. Khan, Ibrahim A. Arif, Ali H. Bahkali [...]

Evolutionary Bioinformatics

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Research article

First published 2006-05

An Optimal Algorithm for Perfect Phylogeny Haplotyping

Ravi Vijayasatya, Amar Mukherjee

Journal of Computational Biology

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Research article

First published 2007-01

Neighbor Joining Algorithms for Inferring Phylogenies via LCA Distances

Ilan Gronau, Shlomo Moran

Journal of Computational Biology

Open access

Research article

First published 2006

Assessing the Applicability of the GTR Nucleotide Substitution Model through Simulations

Laurent Gatto, Daniele Catanzaro, Michel C. Milinkovitch

Evolutionary Bioinformatics

Free access

Research article

First published 2005-7

CBCAnalyzer: Inferring Phylogenies Based on Compensatory Base Changes in RNA Secondary Structures

Matthias Wolf, Joachim Friedrich, Thomas Dandekar [...]

In Silico Biology

Open access

Research article

First published 2012

Inferring the Phylogeny of Bovidae Using Mitochondrial DNA sequences: Resolving power of Individual Genes Relative to complete Genomes

Ibrahim A. Arif, Mohammad A. Bakir, Haseeb A. Khan

Evolutionary Bioinformatics

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