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Research article

First published 2015

Applying Side-chain Flexibility in Motifs for Protein Docking

Hui Liu, Feng Lin, Jian-Li Yang [...]

Genomics Insights

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Research article

First published 2002-08

A Combinatorial Approach to Protein Docking with Flexible Side Chains

Ernst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof [...]

Journal of Computational Biology

Free access

Research article

First published 2005-1

Prediction of HIV-1 Protease Inhibitor Resistance using a Protein–Inhibitor Flexible Docking Approach

Ekachai Jenwitheesuk, Ram Samudrala

Antiviral Therapy

Free access

Research article

First published 2002-8

Comparing Bound and Unbound Protein Structures Using Energy Calculation and Rotamer Statistics

Kerstin Koch, Frank Zöllner, Steffen Neumann [...]

In Silico Biology

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Research article

First published 2016-07

EDGA: A Population Evolution Direction-Guided Genetic Algorithm for Protein–Ligand Docking

Boxin Guan, Changsheng Zhang, Jiaxu Ning

Journal of Computational Biology

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Research article

First published 2016-02

Modeling Protein Loop Structure by Cyclic Coordinate Descent-based Approach

Haiou Li, Lu Sun, Sheng Luo [...]

Journal of Computational Biology

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Research article

First published 2007-12

Hybrid-genetic algorithms for flexible ligand docking

Ashish Ghosh, Anindya Sen

Journal of Intelligent & Fuzzy Systems: Applications in Engineering and Technology

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Research article

First published 1998-12

A Method for Biomolecular Structural Recognition and Docking Allowing Conformational Flexibility

Bilha Sandak, Ruth Nussinov, Haim J. Wolfson

Journal of Computational Biology

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Research article

First published 2025-06

Let’s Not Neglect Drug Discovery to Combat COVID-19: In Silico Study of the Anti-Cancer Compounds Flexible Heteroarotinoids as Candidate Inhibitors Against SARS-CoV-2 Proteins

Sujan Timsina, Masrur Akhter, Donghua H. Zhou

OMICS: A Journal of Integrative Biology

Open access

Research article

First published 2025-6

Identification of Novel Candidate Targets for Fascaplysin through in silico and in vivo Analyses of Shared Targets among Structurally Similar Compounds

Ki-Hoon Park, Junyang Jung, Na Young Jeong

Pharmacognosy Magazine

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