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Research article

First published 2004-08

An Efficient Z-Score Algorithm for Assessing Sequence Alignments

Hilary S. Booth, John H. Maindonald, Susan R. Wilson [...]

Journal of Computational Biology

Open access

Research article

First published 2010

Where Does the Alignment Score Distribution Shape Come from?

Philippe Ortet, Olivier Bastien

Evolutionary Bioinformatics

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Research article

First published 2001-11

Computational Complexity of Multiple Sequence Alignment with SP-Score

Winfried Just

Journal of Computational Biology

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Research article

First published 2004-10

A New Scoring Function and Associated Statistical Significance for Structure Alignment by CE

Yuting Jia, T. Gregory Dewey, Ilya N. Shindyalov [...]

Journal of Computational Biology

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Research article

First published 1998-6

Alignments Without Low-Scoring Regions

Zheng Zhang, Piotr Berman, Webb Miller

Journal of Computational Biology

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Research article

First published 2006-01

Alignment with Context Dependent Scoring Function

Anna Gambin, Jerzy Tiuryn, Jerzy Tyszkiewicz

Journal of Computational Biology

Open access

Announcement

First published 2008

A Simple Derivation of the Distribution of Pairwise Local Protein Sequence Alignment Scores

Olivier Bastien

Evolutionary Bioinformatics

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Research article

First published 2025

Development and Initial Validation of Scores on the School Counselor/MTSS Alignment Scale

Emily Goodman-Scott, Michael T. Kalkbrenner, Jacob Olsen [...]

Journal of Positive Behavior Interventions

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Research article

First published

Effects of Long-Range Correlations in DNA on Sequence Alignment Score Statistics

Philipp W. Messer, Ralf Bundschuh, Martin Vingron [...]

Journal of Computational Biology

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Research article

First published 2020-02

Toward a Dynamic Threshold for Quality Score Distortion in Reference-Based Alignment

Ana A. Hernandez-lopez, Claudio Alberti, Marco Mattavelli

Journal of Computational Biology

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