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Research article

First published 1998-10

A Polyhedral Approach to RNA Sequence Structure Alignment

Hans-Peter Lenhof, Knut Reinert, Martin Vingron

Journal of Computational Biology

Open access

Research article

First published 2009

Predicting Consensus Structures for RNA Alignments via Pseudo-Energy Minimization

Junilda Spirollari, Jason T.L. Wang, Kaizhong Zhang [...]

Bioinformatics and Biology Insights

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Research article

First published 2011-2

The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data

Robert Hoehndorf, Colin Batchelor, Thomas Bittner [...]

Applied Ontology

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Research article

First published 2006-03

Consensus Folding of Unaligned RNA Sequences Revisited

Vineet Bafna, Haixu Tang, Shaojie Zhang

Journal of Computational Biology

Free access

Research article

First published 2008-2

The GTP Binding Sites Interacted with RNA-Dependent RNA Polymerase of Classical Swine Fever Virus in de novo Initiation

Zhuofei Xu, Yanjie Chao, Youhui Si [...]

In Silico Biology

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Research article

First published

Exact Calculation of Distributions on Integers,with Application to Sequence Alignment

Lee A. Newberg, Charles E. Lawrence

Journal of Computational Biology

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Research article

First published 1984-02

Cloning and Sequencing of the Ribosomal RNA Genes in Maize: The 17S Region

Joachim Messing, John Carlson, Gretchen Hagen [...]

DNA and Cell Biology

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Research article

First published 2015-03

Chaining Sequence/Structure Seeds for Computing RNA Similarity

Laetitia Bourgeade, Cédric Chauve, Julien Allali

Journal of Computational Biology

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Research article

First published 2007-10

Locality and Gaps in RNA Comparison

Rolf Backofen, Shihyen Chen, Danny Hermelin [...]

Journal of Computational Biology

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Research article

First published 2020-02

Toward a Dynamic Threshold for Quality Score Distortion in Reference-Based Alignment

Ana A. Hernandez-lopez, Claudio Alberti, Marco Mattavelli

Journal of Computational Biology

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