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Research article

First published 2007-03

Computing the Partition Function and Sampling for Saturated Secondary Structures of RNA,with Respect to the Turner Energy Model

J. Waldispühl, P. Clote

Journal of Computational Biology

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Research article

First published 2019-3

A Boltzmann Sampler for 1-Pairs with Double Filtration

Christopher Barrett, Qijun He, Fenix W. Huang [...]

Journal of Computational Biology

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Research article

First published 2000-02

Prediction of RNA Base Pairing Probabilities on Massively Parallel Computers

Martin Fekete, Ivo L. Hofacker, Peter F. Stadler

Journal of Computational Biology

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Research article

First published 2013-07

An Efficient Algorithm for Upper Bound on the Partition Function of Nucleic Acids

Hamidreza Chitsaz, Elmirasadat Forouzmand, Gholamreza Haffari

Journal of Computational Biology

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Research article

First published 2013-12

Computational Selection and Experimental Validation of Allosteric Ribozymes That Sense a Specific Sequence of Human Telomerase Reverse Transcriptase mRNAs as Universal Anticancer Therapy Agents

Robert Penchovsky, Gergana T. Kostova

Nucleic Acid Therapeutics

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Research article

First published 2021-02

Human MicroRNA Target Prediction via Multi-Hypotheses Learning

Mohammad Mohebbi, Liang Ding, Russell L. Malmberg [...]

Journal of Computational Biology

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Research article

First published 2014-03

Computing the Probability of RNA Hairpin and Multiloop Formation

Yang Ding, William A. Lorenz, Ivan Dotu [...]

Journal of Computational Biology

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Research article

First published 2012-07

Topology of RNA-RNA Interaction Structures

Jørgen E. Andersen, Fenix W.D. Huang, Robert C. Penner [...]

Journal of Computational Biology

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Research article

First published 2015-9

Right Ventricular Protein Expression Profile in End-Stage Heart Failure

Yan Ru Su, Manuel Chiusa, Evan Brittain [...]

Pulmonary Circulation

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Research article

First published 1996-6

Base Pairing Probabilities in a Complete HIV-1 RNA

Martijn A. Huynen, Alan Perelson, Wayne A. Vieira [...]

Journal of Computational Biology

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