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1-10 of 612 results for PROTEIN SEQUENCE DESIGN

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Select article: Efficient Algorithms for Protein Sequence Design and the Analysis of Certain Evolutionary Fitness Landscapes

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Research article

First published 1999-10

Efficient Algorithms for Protein Sequence Design and the Analysis of Certain Evolutionary Fitness Landscapes

Jon M. Kleinberg

Journal of Computational Biology

Select article: A Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model

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Research article

First published 2002-10

A Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model

James Aspnes, Julia Hartling, Ming-Yang Kao [...]

Journal of Computational Biology

Select article: A Deterministic Optimization Approach to Protein Sequence Design Using Continuous Models

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Other

First published 2005-02

A Deterministic Optimization Approach to Protein Sequence Design Using Continuous Models

Sung K. Koh, G. K. Ananthasuresh, Saraswathi Vishveshwara

The International Journal of Robotics Research

Select article: comets (Constrained Optimization of Multistate Energies by Tree Search): A Provable and Efficient Protein Design Algorithm to Optimize Binding Affinity and Specificity with Respect to Sequence

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Research article

First published 2016-05

comets (Constrained Optimization of Multistate Energies by Tree Search): A Provable and Efficient Protein Design Algorithm to Optimize Binding Affinity and Specificity with Respect to Sequence

Mark A. Hallen, Bruce R. Donald

Journal of Computational Biology

Select article: BBK* (Branch and Bound Over K*): A Provable and Efficient Ensemble-Based Protein Design Algorithm to Optimize Stability and Binding Affinity Over Large Sequence Spaces

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Research article

First published 2018-07

BBK* (Branch and Bound Over K*): A Provable and Efficient Ensemble-Based Protein Design Algorithm to Optimize Stability and Binding Affinity Over Large Sequence Spaces

Adegoke A. Ojewole, Jonathan D. Jou, Vance G. Fowler [...]

Journal of Computational Biology

Select article: Automated Molecular Library Generation of Proteic Fragments by Virtual Proteolysis for Molecular Modelling Studies

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Research article

First published 2006-9

Automated Molecular Library Generation of Proteic Fragments by Virtual Proteolysis for Molecular Modelling Studies

Vito Librando, Danilo Gullotto, Zelica Minniti

In Silico Biology

Select article: PROSES: A Web Server for Sequence-Based Protein Encoding

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Research article

First published 2018-10

PROSES: A Web Server for Sequence-Based Protein Encoding

İrfan Kösesoy, Murat Gök, Cemil Öz

Journal of Computational Biology

Select article: Modeling and Analysis of Protein Design under Resource Constraints

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Research article

First published 2005-03

Modeling and Analysis of Protein Design under Resource Constraints

Yuval Nov, Lawrence M. Wein

Journal of Computational Biology

Select article: Structure-Approximating Inverse Protein Folding Problem in the 2D HP Model

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Research article

First published 2005-12

Structure-Approximating Inverse Protein Folding Problem in the 2D HP Model

Arvind Gupta, Ján Maňuch, Ladislav Stacho

Journal of Computational Biology

Select article: Generative AI Models for the Protein Scaffold Filling Problem

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Research article

First published 2025-02

Generative AI Models for the Protein Scaffold Filling Problem

Letu Qingge, Kushal Badal, Richard Annan [...]

Journal of Computational Biology

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