Sage Journals: Discover world-class research

Open access

Review article

First published 2015

IVisTMSA: Interactive Visual Tools for Multiple Sequence Alignments

Muhammad Tariq Pervez, Masroor Ellahi Babar, Asif Nadeem [...]

Evolutionary Bioinformatics

Open access

Research article

First published 2014

Evaluating the Accuracy and Efficiency of Multiple Sequence Alignment Methods

Muhammad Tariq Pervez, Masroor Ellahi Babar, Asif Nadeem [...]

Evolutionary Bioinformatics

Open access

Review article

First published 2019

SAliBASE: A Database of Simulated Protein Alignments

Muhammad Tariq Pervez, Hayat Ali Shah, Masroor Ellahi Babar [...]

Evolutionary Bioinformatics

Retricted access

Research article

First published 2023-03

MAMMLE: A Framework for Phylogeny Estimation Based on Multiobjective Application-aware Multiple Sequence Alignment and Maximum Likelihood Ensemble

Muhammad Ali Nayeem, Naser Anjum Samudro, M. Saifur Rahman [...]

Journal of Computational Biology

Open access

Research article

First published 2009

Predicting Consensus Structures for RNA Alignments via Pseudo-Energy Minimization

Junilda Spirollari, Jason T.L. Wang, Kaizhong Zhang [...]

Bioinformatics and Biology Insights

Open access

Research article

First published 2020

MAGA: A Supervised Method to Detect Motifs From Annotated Groups in Alignments

Pablo Mier, Miguel A Andrade-Navarro

Evolutionary Bioinformatics

Free access

Research article

First published 2009-11

GEN-SNiP: An Online Tool to Find Polymorphisms in a Genome

David B. Whyte, Gopakumar Gopalakrishnan Nair, Achuthsankar S. Nair [...]

In Silico Biology

Retricted access

Research article

First published 2014-07

Simultaneous Alignment and Folding of Protein Sequences

Jérôme Waldispühl, Charles W. O'Donnell, Sebastian Will [...]

Journal of Computational Biology

Free access

Research article

First published 2007-2

nWayComp: A Genome-Wide Sequence Comparison Tool for Multiple Strains/Species of Phylogenetically Related Microorganisms

Jiqiang Yao, Hong Lin, Harshavardhan Doddapaneni [...]

In Silico Biology

Retricted access

Research article

First published 2004-10

ThurGood: Evaluating Assembly-to-Assembly Mapping

Hagit Shatkay, Jason Miller, Clark Mobarry [...]

Journal of Computational Biology

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