Sage Journals: Discover world-class research

Open access

Research article

First published 2024

A Strategy to Compare Single-Cell RNA Sequencing Data Sets Provides Phenotypic Insight into Cellular Heterogeneity Underlying Biological Similarities and Differences Between Samples

Dan C Wilkinson, Elizabeth Tallman, Mishal Ashraf [...]

Bioinformatics and Biology Insights

Free access

Research article

First published 2016-6

Discovering Biology in Periodic Data through Phase Set Enrichment Analysis (PSEA)

Ray Zhang, Alexei A. Podtelezhnikov, John B. Hogenesch [...]

Journal of Biological Rhythms

Open access

Research article

First published 2008

A Biological Evaluation of Six Gene Set Analysis Methods for Identification of Differentially Expressed Pathways in Microarray Data

Irina Dinu, Qi Liu, John D. Potter [...]

Cancer Informatics

Open access

Research article

First published 2014

Revealing Biological Pathways Implicated in Lung Cancer from TCGA Gene Expression Data Using Gene Set Enrichment Analysis

Binghuang Cai, Xia Jiang

Cancer Informatics

Retricted access

Research article

First published 2013-08

Redundancy Control in Pathway Databases (ReCiPa): An Application for Improving Gene-Set Enrichment Analysis in Omics Studies and “Big Data” Biology

Juan C. Vivar, Priscilla Pemu, Ruth McPherson [...]

OMICS: A Journal of Integrative Biology

Open access

Research article

First published 2016-10-11

Names are not good enough: Reasoning over taxonomic change in the Andropogon complex 1

Nico M. Franz, Mingmin Chen, Parisa Kianmajd [...]

Semantic Web: – Interoperability,Usability,Applicability

Retricted access

Research article

First published 2009-12

Prior biological knowledge-based approaches for the analysis of genome-wide expression profiles using gene sets and pathways

Michael C Wu, Xihong Lin

Statistical Methods in Medical Research

Free access

Research article

First published 2009-5

Classification of Information Fusion Methods in Systems Biology

Jane Synnergren, Björn Olsson, Jonas Gamalielsson

In Silico Biology

Open access

Research article

First published 2008

Non-Negative Matrix Factorization for the Analysis of Complex Gene Expression Data: Identification of Clinically Relevant Tumor Subtypes

Attila Frigyesi, Mattias Höglund

Cancer Informatics

Free access

Research article

First published 2009-2

Analysis of n-Gram based Promoter Recognition Methods and Application to Whole Genome Promoter Prediction

T. Sobha Rani, Raju S. Bapi

In Silico Biology

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