Abstract
Background:
In recent years, biomedical devices have proven to be able to target also different neurological disorders. Given the rapid ageing of the population and the increase of invalidating diseases affecting the central nervous system, there is a growing demand for biomedical devices of immediate clinical use. However, to reach useful therapeutic results, these tools need a multidisciplinary approach and a continuous dialogue between neuroscience and engineering, a field that is named neuroengineering. This is because it is fundamental to understand how to read and perturb the neural code in order to produce a significant clinical outcome.
Results:
In this review, we first highlight the importance of developing novel neurotechnological devices for brain repair and the major challenges expected in the next years. We describe the different types of brain repair strategies being developed in basic and clinical research and provide a brief overview of recent advances in artificial intelligence that have the potential to improve the devices themselves. We conclude by providing our perspective on their implementation to humans and the ethical issues that can arise.
Conclusions:
Neuroengineering approaches promise to be at the core of future developments for clinical applications in brain repair, where the boundary between biology and artificial intelligence will become increasingly less pronounced.
Introduction
At the beginning of the third millennium, we are witnessing the birth of
New multidisciplinary fields are emerging in every section of biology. As underlined by Fields (2001),
In this review, we first introduce why it is important to develop novel neurotechnologies for brain repair. Second, we describe the logic underlying the function of artificial devices for therapeutic purposes. We then illustrate the different types of neurotechnologies being developed in basic and clinical research and provide a brief overview of recent advances in artificial intelligence (AI), with the possibility of combining the two worlds. We conclude by providing our perspective on their implementation on humans and the possible implications for dual use.
Why Neuroengineering?
Brain matters: the global burden of disease of neurological disorders
A recent report by the World Health Organization (WHO) pointed out that neurological disorders (including neuropsychiatric conditions) constitute 6.3% of the global burden of disease (GBD; Chin and Vora, 2014; WHO, 2006). With the highest GBD in Europe (11.2%), neurological disorders represent the most invalidating clinical condition, exceeding HIV, malignant neoplasm, heart ischemia, respiratory and digestive diseases. Among neurological disorders, more than half of the burden in disability-adjusted life years (DALYs) is constituted by cerebrovascular diseases, such as stroke (55%), followed by Alzheimer’s disease and other dementias (12%), migraine (7.9%) and epilepsy (7%) – see Table 1.
Top diseases in the GBD at the European level.
GBD: global burden of disease.
The number of people affected by stroke and dementia is likely to increase in the coming years, because of the rapidly ageing population, whereas migraine and epilepsy affect people at any age and may be so severe to compromise the patient’s ability to work. Therefore, enhancing recovery of cognitive, sensory and motor functions in these conditions has become a global priority in healthcare.
From the scenario depicted above, it is clear that brain disorders represent one of the biggest challenges for healthcare and society and that the lack of effective treatments demands for innovative interventions.
The challenge
Since the pioneering work in the 1970s by Eberhard Fetz (Fetz and Finocchio, 1971; Fetz, 1969) and at the end of the 1990s by the groups of Andrew Schwartz and Miguel Nicolelis (Nicolelis, 2001, 2003; Taylor et al., 2002), we have experienced an exponential development of neuroengineering tools for brain repair, such as brain modulators, brain–machine interfaces (BMIs) and brain prostheses. For biomedical engineers, these technologies can be the key to innovative treatments for brain disorders, as witnessed by several initiatives in the United States (Brain Research through Advancing Innovative Neurotechnologies - BRAIN), in Europe (Human Brain Project - HBP) and in Japan (Brain Mapping by Innovative Neurotechnologies for Disease Studies). The interest in novel technologies relies on the possibility to use targeted electrical stimulation delivered by smart microfabricated devices to replace pharmaceutical interventions, recently named in major journals as

Patent analysis in neuroengineering. (a) Number of published patents per year from 1970 to 2017. (b) Map showing the countries where the patents were filed. The United States leads with 3073 patents followed by Germany with 147, Netherlands with 131, Switzerland with 127 and China with 82. The remaining nations are below 65. (c) Number of published patents per year (from 1998 to 2017) by the 15 most active applicants. Patent data were collected using the Patent Inspiration database (http://www.patentinspiration.com/) based on the DOCDB database from the European Patent Office (EPO). DOCDB database contains bibliographic data from over 102 countries. Bibliographic data include titles, abstracts, applicants, inventors, citations, literature citations, code classifications and family info. The database is updated on a weekly basis. Patents were searched from January 1970 to October 2017 using the following Boolean search strategy: (‘neurostimulation’ OR ‘neural stimulation’ OR ‘brain stimulation’) in title or abstract.
The achievement of a truly useful bi-directional interface with the central nervous system (CNS) requires overcoming a set of different challenges (Thakor, 2013). Understanding the neural code is a priority, which is usually split into the coding problem (i.e. reading the code from the CNS) and the encoding problem (i.e. writing the code back into the CNS). In this regard, giant steps have already been taken in the last decades, but there is room for much improvement (Jun et al., 2017; Panzeri et al., 2017; Stanley, 2013). From the technical point of view, an urgency is represented, for example, by the resolution of the recorded signal which is linked to the invasiveness of the recording system (Lee et al., 2013; Nunez and Srinivasan, 2006). A non-invasive recording technique like electroencephalography (EEG) has a low spatial resolution and signal-to-noise ratio but no clinical risk (Chaudhary et al., 2016). On the other hand, invasive recordings offer higher spatial resolution and signal-to-noise ratio but at the cost of higher clinical risks (Baranauskas, 2014; Tehovnik et al., 2013).
Similar issues regard the techniques used to stimulate the CNS, which range from non-invasive methods, such as non-invasive brain stimulation (NIBS; Hummel and Cohen, 2005), to more invasive procedures, such as intracortical stimulating electrodes (Tehovnik et al., 2006).
Another concern regards the algorithms mediating the interaction between the nervous tissue and an artificial device: the control policy may exhibit different levels of sophistication, from simple decoding techniques up to the implementation of smarter techniques that leverage on machine learning and AI (Andersen et al., 2014; Pohlmeyer et al., 2014; Shenoy and Carmena, 2014; Wissel et al., 2013). The development of these control algorithms for the clinical practice undoubtedly benefits brain disorders including neurological and neuropsychiatric conditions.
We will show in the next paragraphs that motor disorders (like Parkinson’s disease - PD, epilepsy and depression) are current target diseases for neuroengineering applications.
Advances in Neuroengineering
Architecture and control algorithms: some definitions
Neurotechnological devices operate through architecture and control strategies which deserve a brief description in order to better classify what has been developed in the course of the years. Bearing in mind that no approach is better than another in an absolute sense, but each serves a specific purpose, we define these strategies according to their operating input/output (I/O) function and use the logic underlying that function (hereafter, the
The first distinction should be made between open-loop and closed-loop architectures (Greenwald et al., 2016; Wright et al., 2016), both involving two systems – a device (D) and a brain (B) – characterized by their specific I/O functions (ID/OD for the device and IB/OB for the brain; Figure 2(a)). In open-loop systems (Figure 2(b)), the output of the device (OD) consists of a stimulus (e.g. electrical pulse) which is directly delivered to the brain (IB = OD). The brain processes the incoming information (IB) and produces an output response (OB). The input to the device (ID) can be any function determining the features of the stimulation sequence; however, it is not modulated by any feedback from the brain.

I/O control systems for neuroengineering. (a) Representation of the elements involved in a neurotechnological tool: an artificial device (D block) and a portion of the CNS (B block). (b) Open-loop architecture. The device is programmed to output a stimulus (device output – OD), which also represents the input to the brain (device input – ID); in turn, the brain generates an output response (brain output – OB). The open-loop device cannot read brain electrical activity (black trace) and thus operates independent of it. (c) Control algorithms for closed-loop architecture. In closed-loop fashion, the brain output response (OB) is fed back to the device, thus serving as an input to the device (brain input – IB) and determining the device output (OD). The
Closed-loop devices are based on feedback: the output of the brain (OB), consisting in the ongoing brain activity or its processed version, serves as the input for the device (ID = OB), which triggers the device operation. The output of the device (OD) is the input to the brain (IB = OD). This system generates an I/O loop, which continues indefinitely. With regard to the modus operandi of closed-loop devices, we use a hierarchical scheme to rank the sophistication of control algorithms and distinguish them in Reactive, Responsive and Adaptive (Figure 2(c)).
Reactive
The algorithm is based on a single-input-single-output paradigm. A typical example is activity-dependent stimulation in which a stimulus is delivered with a fixed delay upon the detection of an electrophysiological event in the recorded brain area, that is, stimulation is phase-locked to the brain activity (Guggenmos et al., 2013; Jackson et al., 2006). The output parameters are fixed by the human operator, but the device is triggered by an input signal detected by the system. This is a basic I/O system, representing the simplest implementation of control algorithm, which does not operate any
Responsive
The algorithm may process several inputs and respond with different outputs, but its operation is task oriented, contextual and conditional. The algorithm is provided with multiple built-in output options. For example, a stimulation algorithm may be instructed to modify its output frequency proportionally to the frequency of the recorded event(s) (Beverlin and Netoff, 2012; Morrell and Halpern, 2016). At any given time, the system follows a stimulation policy which is a function of the feedback it receives from the brain. In addition, the system contains a set of stimulation policies and decides, based on the context, which one to follow. All the stimulation policies and their activation rules are, however, fixed and predefined at design time.
Adaptive
The algorithm is similar to the previous one, but it implements an adaptive I/O response, in that it is capable of real-time self-adjustment according to past experience, a set of learning rules and performance evaluation or reward functions. The algorithm
Neuroengineering from bench to bedside
In the early seventies, the seminal work of Fetz (1969) and the observations of Schmidt (1980) and Georgopoulos et al. (1986) revealed that specific movement trajectories activate specific ensembles of cortical motor neurons and thus the observation of these ensembles can help predict the desired direction of the movement. These studies laid the foundation for brain signal decoding and the development of neuroprosthetics. Other types of neuroprostheses are directed towards the restoration of sensory capabilities. The first examples in this context are the cochlear implant that uses electrical stimulation to restore hearing in the profoundly deaf (Loeb et al., 1983) and the retina implant that translates visual information into stimulation patterns directed towards retinal neurons (Humayun, 2001). Nowadays, brain modulators, BMIs and brain prostheses are neurotechnological tools under intense preclinical investigation.
Brain modulators
Brain modulators are devices that modulate brain patterns by means of externally applied current or magnetic fields, or by electrical stimulation of deep brain structures (deep brain stimulation - DBS). Here, we refer specifically to DBS devices, since they represent the majority of brain modulators. Typically, the development of these devices aims at treating movement disorders (e.g. PD; Collomb-Clerc and Welter, 2015; Duker and Espay, 2013), epilepsy (Laxpati et al., 2014) and psychiatric conditions (such as obsessive-compulsive disorder and major depression; Berlim et al., 2014; Holtzheimer et al., 2017). Current preclinical studies for the development of DBS devices implement both open-loop and closed-loop architectures, the latter deploying a variety of control algorithms, including reactive, responsive and adaptive stimulation policies (see Panuccio et al., 2016 for a comprehensive review). Well-known clinical applications of DBS are movement disorders and drug-refractory epilepsy. Approved brain modulators for movement disorders are open-loop devices delivering high-frequency electrical stimulation (Groiss et al., 2009; Figure 3(a)). With regard to epilepsy, the Food and Drug Administration (FDA) agency has recently approved the responsive neurostimulation (RNS) system NeuroPace® as an adjunctive DBS therapy for drug-refractory epileptic patients (Bergey et al., 2015; Thomas and Jobst, 2015). This device operates in closed loop and implements a responsive algorithm able to recognize abnormal brain activity and consequently adjusts its electrical stimulation response. It must be mentioned that recently a DBS non invasive strategy for electrically stimulating neurons at depth was developed (Grossman et al., 2017) and, although human trials have not yet been conducted, this technique holds great promise for PD patients.

Neuroengineering devices for brain repair. (a) Brain modulator for DBS. The device is implanted into deep brain structures and may be based on open- or closed-loop architecture. (b) A BMI conveys the electrical activity of the recorded brain area to the robotic end effector. In this rendition, the established system is made up of the input brain area, the interface apparatus and the robotic hand. In this case, an open-loop strategy is implemented: visual feedback aids in movement planning and the required adjustments, which, in turn, influence the function of the interface apparatus. (c) A brain prosthesis is an artificial device implanted in the brain to replace brain activity or to reconnect disconnected brain areas.
BMIs
The term BMI refers to a device that interfaces the brain with a robotic end effector, like a robotic limb (Figure 3(b)). BMIs aim at restoring missing motor functions in patients stricken by a disabling neurological condition, brain injury or limb amputation. Following the pioneering demonstration of the feasibility of this approach (Chapin et al., 1999), BMIs have become increasingly sophisticated and have proved to be successfully applicable to paralysed humans (Ajiboye et al., 2017; Bouton et al., 2016; Hochberg et al., 2012). An increasing fraction of the BMI community is also devoted to the investigation of neural stimulation as a tool to provide subjects with an artificial channel of feedback information (Flesher et al., 2016; Micera et al., 2008; Raspopovic et al., 2014).
Brain prostheses
Brain prostheses are intended as artificial systems directly connected with the brain in order to replace a damaged area or bridge disconnected areas and regain the lost functionality (Figure 3(c)). For example, the device may be used to reconnect somatosensory and motor cortical areas in order to restore forelimb movement impaired by brain injury. A brain prosthesis implementing an architecture following a closed-loop reactive policy has been presented for the first time by Kansas University Medical Center (Guggenmos et al., 2013). Another promising example is represented by the hippocampal memory prosthesis, in which the neural activity of specific hippocampus areas suitably processed can be used to manipulate and thus restore (through ad hoc electrical stimulation) cognitive mnemonic processes (Berger et al., 2011, 2012; Song et al., 2015; Song and Berger, 2014). The development of brain prostheses is still at the preclinical stage.
At the boundaries between BMIs and brain prostheses lays the work of Courtine and co-workers (Wenger et al., 2014, 2016) who successfully demonstrated that spatiotemporal modulations of the spinal cord can restore the locomotion of spinal cord–injured rodents. Indeed, it needs to be stressed that the borderline among these three types of technology is not always clear-cut; rather, some overlaps can be identified. For example, brain modulators may be integrated into brain prostheses, since these devices must stimulate target brain areas in order to act as a bridge or as a replacement within the brain.
It is worth underlining that all the abovementioned neuroprosthetic tools are taking advantage of the recent software and hardware progress in terms of the number of recorded electrodes and related data processing (Jun et al., 2017; Mahmud et al., 2017; Mahmud and Vassanelli, 2016). Moreover, improved computational capabilities can be achieved thanks to innovative neuromorphic synthetic devices (Bonifazi et al., 2013; Chiolerio et al., 2017) also based on memristor technology (Gupta et al., 2016). Technological progress interests also the field of the electrophysiological techniques. For example, optogenetics (Paz and Huguenard, 2015) and sonogenetics (Ibsen et al., 2015) allow, through light and sound, respectively, precise spatiotemporal control of cells and therefore the manipulation of specific brain circuits. These techniques can therefore be exploited in future neuroprosthetic devices with important implication for the treatment of neurological disorders (Cheng et al., 2014).
Neuroengineering meets AI
Intelligent systems: an historical perspective
The foundation of AI as an academic discipline dates back to the Dartmouth Conference in 1956 (now regarded as
The invention of the first general-purpose programmable digital computer, the Z3 by Konrad Zuse in 1941 (see Zuse (1993) for historical review), inspired the vision of building an electronic brain. In 1948, Norbert Wiener described
From this brief excursus, it emerges that
Intelligent neurotechnologies
The scientific community has converged to the general consensus that the establishment of a functional partnership between biological and artificial components, as implemented in closed-loop systems, is a crucial prerequisite to successfully achieve functional brain repair by means of neuroengineering (see, for example, the change in perspective with regard to open- versus closed-loop stimulators for PD and epilepsy (Rosin et al., 2011)). However, the progressive parallelism between closed-loop architecture and intelligent operation has been made so that the closed-loop paradigm is generally considered as intelligent
In order to provide a definition of
Translating these canonical concepts to the design of intelligent neuroengineering, the conceived devices should exhibit the capability of dynamic adaptation to the flow of neuronal information that is continuously changing due to its reciprocal interaction with the artificial device. That is, a truly intelligent system should intrinsically exhibit (1) the ability to acquire information (
Outstanding advancements have been recently made leading to self-adjusting neuroprostheses (Bouton et al., 2016) and adaptive algorithms for DBS technology to treat epileptic disorders (Panuccio et al., 2013; Pineau et al., 2009). Based on statistical machine learning techniques, these algorithms exhibit autonomous decisional power and evolution, overcoming the initial expectations of the designers as they are capable of elaborating the best (mostly unexpected) intervention policy to achieve a specified goal, rather than picking the predefined most appropriate task from a look-up table (Elbasiouny, 2017).
The future of AI for neurotechnologies
Humans have been striving for decades to mimic the brain using computing machines. However, despite sporadic success in very specific applications (e.g. IBM Deep Blue beating the World Chess Champion in 1997), progress has been slow. Thanks to deep learning, however, AI has received growing attention, in academia and industry (LeCun et al., 2015). With the adoption of deep neural networks, machines today demonstrate stunning performances in tasks that have been previously considered difficult, like automatic classification of images (see Russakovsky et al. (2015) for a review) and speech signals (Hinton et al., 2012). Deep learning has also been applied successfully to solve reinforcement learning problems in the presence of very large state space (perhaps the most popular example is the application of deep learning to implement a software that learns to play Atari games (Mnih et al., 2015) and the game of Go (Silver et al., 2016)).
Deep learning has strong potentials for the development of neuroengineering devices, because the strength of deep networks is in their ability to process complex signals (like images or sound) to provide a low-dimensional representation that retains task-dependent information but it is much easier to manipulate. For this reason, it is reasonable to assume that deep learning could be employed as an efficient way to encode the complex signals that originate from the sensory system or from implanted arrays of electrodes (Mahmud et al., 2018).
The key ingredients that contribute to the success of deep learning are as follows: the availability of large dataset and affordable hardware for massive parallel computing (typically graphical processing units - GPUs) that can train neural networks with a large number of layers and millions of parameters in a reasonable amount of time. Today, these are not problems for conventional applications of deep learning. Humans produce large amounts of data through smartphones, Internet and social media, while powerful GPUs in datacenters are accessible through cloud computing. However, these may be stumbling blocks for adoption of deep learning in neuroengineering devices.
For use of deep learning in embedded systems, companies have started to develop dedicated hardware supporting the deployment of deep neural networks with real-time performance, low power consumption and small footprint (NVIDIA Jetson TX2 https://www.nvidia.com/en-us/autonomous-machines/embedded-systems-dev-kits-modules/, ARM/MALI https://community.arm.com/graphics/f/discussions/165/deep-learning-inference-on-arm-mali-super-efficient-convolutional-neural-networks-implemented-on-arm-mali-based-socs, Intels’ Movidius https://developer.movidius.com/). This trend is likely to continue in the following years, and it is reasonable to assume that affordable solutions supporting the deployment of deep learning systems in neuroengineering will be available in the future.
Adopting data-driven techniques for training such devices could, however, be difficult, because it requires long periods of data acquisition from human patients. An emerging area of research in machine learning deals with this problem by leveraging on existing knowledge when solving a new task (Gopalan et al., 2015). Similar techniques have been used for the classification of electromyography (EMG) signals (Gregori et al., 2017; Tommasi et al., 2013). The benefit of such techniques in the control of prosthetic devices is, however, debated (Gregori et al., 2017) and may need to be further developed. A similar problem is being studied in robotics for training visual recognition systems from small dataset (Pasquale et al., 2016; Schwarz et al., 2015). In this case, the main idea is to rely on neural models that have been trained for a similar task for which a large dataset is available and to adapt the network to solve a novel task, using much less data.
Ethical considerations
The rapid advancements of neurotechnologies for clinical use raise important ethical questions that urge to be addressed (Goering and Yuste, 2016; Greely et al., 2016; Ienca et al., 2017; Muller and Rotter, 2017) since they may as well be implemented to augment cognitive abilities or body performance (Roco and Bainbridge, 2003). Indeed, a PubMed search of ‘neurotechnology ethics’ returns almost 40 entries, of which the earliest dates back to 2004, while 16 papers were published only in the last 2 years. This provides an indication that a growing number of psychologists and science philosophers are shifting their interests towards the ethical implications of these novel technologies.
Ethical considerations can be raised at different levels (Klein and Nam, 2016). A priority is represented by the concerns of end-users who report a controversial attitude towards neurotechnology (Yuste et al., 2017). For example, patients affected by PD describe apprehensions regarding the control over device function, authentic self, relationship effects and meaningful consent (Klein et al., 2016). In general, patients demand a major involvement in the developing process of the technology programmed for their own use and rehabilitation, and also a major attention to the specific needs of their particular disease, given that different classes of patients have different requirements (Sullivan et al., 2017). It is all too common for a preclinical researcher never to have met a person with the disease they are working on, with the consequence that patients’ hopes and aspirations or the burden of the illness are not appreciated (Garden et al., 2016).
Another important area of related ethical interests regards the
The Nuffield Council of Bioethics indicates that blending humans with machines may lead to the man as a ‘prosthetic god’, with both exciting and scary implications, and warns that these considerations have to be taken into account when designing neurotechnologies (Nuffield Council on Bioethics (NCB), 2013).
Conclusion
The long-going effort of humans to build thinking computers and artificial replacement parts for the human body has landed on a very fertile ground. Still, it is clear that machines may be successful at solving specific problems but are still far from matching the capabilities of the human brain. As of today, advanced complex machine learning algorithms and neuromorphic engineering have not yet been established for clinical applications. Nonetheless, such remarkable approaches promise to be at the core of future neuroengineering for brain repair, where the boundary between biology and AI will become increasingly less pronounced.
Footnotes
Acknowledgements
The authors wish to thank Prof. Diego Ghezzi for useful inputs on the manuscript. G.P., M.S. and M.C. conceived the manuscript. G.P., M.S., I.C. and S.B. elaborated the core conceptual design. All authors have written and approved the final version of the manuscript. G.P. and M.S. contributed equally to this work.
Declaration of conflicting interests
The author(s) declared no potential conflicts of interest with respect to the research, authorship and/or publication of this article.
Funding
G.P. was supported by the Marie Skłodowska-Curie Individual Fellowship Re.B.Us, Grant Agreement no. 660689, funded by the European Union under the framework programme Horizon 2020.
