Abstract
This study documents the community composition and forest structure of lowland rainforest in eastern Madagascar, with a first quantitative description of the primary lowland rainforest of Reserve Naturelle Intégrale de (RNI) Betampona. An intensive field survey of vegetation and environmental factors was conducted over two consecutive field campaigns in RNI Betampona, an isolated primary forest reserve located
Introduction
Removal and conversion of tropical forest ecosystems have occurred at an alarming rate globally [1–4]. Tropical deforestation causes grave consequences on local and global scales, such as crashing biodiversity numbers, increased carbon emissions to the atmosphere and permanent changes to local hydrology. The omnipresence of tropical forest clearing inspires research on these ecosystems, as well as a need for increased conservation measures. Most studies have found low forest-recovery rates and a lack or delay of recovery following land clearing or agriculture abandonment [5–7], resulting in large areas of severely degraded landscapes. The African island nation of Madagascar represents an extreme example of these trends. Scientific study of many of Madagascar's highly threatened habitats is still in initial biological descriptive stages, highlighting the fundamental need for understanding the structure and function of these habitats on an ecosystem level lest they disappear.
As one of the world's most threatened hotspots for terrestrial biodiversity, Madagascar is an island with a high conservation priority [2, 8, 9]. It has an exceptional degree of endemism and biodiversity, with estimates of vascular plant diversity ranging between 10,000-12,000 species [13–15]. The rates of endemism for both flora and fauna are estimated around 80% to 90% [1,16, 17], and tree and large shrub species have endemism as high as 96% [14]. These species face extinction due to habitat loss and fragmentation caused by land conversion practices [1, 10–12]. Indeed, deforestation in Madagascar is estimated at 1,100km2 per year, resulting in the loss and degradation of over 90% of the original forest cover, especially in low topographic and highly populated areas. [17–19]. In the face of this extreme deforestation, the survival of numerous plant and animal species currently is severely threatened.
Lowland rain forests in Madagascar are characterized by the presence of dense closed-canopy stands of evergreen trees with canopies rarely exceeding and usually less than 30 meters in height. There is relatively low diversity of large-leaved plants, particularly monocots — a feature that has been attributed to acclimation or adaptation to poor soils and low water supply [23]. The eastern lowland rainforests of Madagascar have also been noted for their unique richness of palm (Arecaceae), pandan (Pandanaceae), bamboo (Graminaceae) and tree-fern species (Cyatheaceae). For example, the pandan (Pananaceae) family is represented by 70 species found mostly in the eastern forests of Madagascar [16]. This contrasts with large areas of tropical East Africa, where there are few species of palms and pandans, which are confined to topographically-determined wet sites [23]. Canopy emergents such as
There have been numerous inventories of the floral composition of Malagasy rainforests [20–24], and other studies have classified the spatial extent of the remaining forests using remote sensing [18, 25–27]. In addition, physiologically descriptive botanical classification investigations are ongoing in many of Madagascar's unique ecosystems. However, few, if any publications document the patterns of tree species composition, diversity and forest structure within Malagasy lowland rainforest ecosystems. Clearly, such characterization, in conjunction with ongoing botanical descriptions, is needed for the successful conservation of the biodiversity of Madagascar's lowland rainforests.
At the current study site, a few unpublished forest inventories have been recorded. However, these studies were confined to small geographic areas within the Reserve or concentrate on proximity to habitat and food sources for faunal species of interest,
Methods
Study site
For this study, field measurements were carried out in Reserve Naturelle Intégrale de (RNI) Betampona (translated: Betampona Special Reserve), a protected rainforest site in eastern Madagascar (Fig. 1). This forest is one of very few remaining tracts of primary lowland rainforest in Madagascar [18]. RNI Betampona is highly protected and only accessible for scientific research through governmental approval. The 2228-hectare reserve is situated to the northwest of the port town of Tamatave (17°15' - 17°55' S; 49°12' - 49°15' E), about 45km west from the Indian Ocean coast. The forests have been under some form of government protection since 1927, but enforcement of protection laws was mostly absent until the late 1980s. According to the Reserve officials,
Vegetation inventory plots 2004-2005
To inventory tree species in RNI Betampona, field surveys were completed in 2004 and 2005. Between July and September in 2004, one hundred 10m-diameter circular plots were established in primary or recovering primary forest (Fig. 1). Locations for these plots were chosen at random intervals along the trail route followed on a given day. Once located, plot centers were flagged and specific locations were described in detail for repeat plot measurements in 2005. Qualitative boundary descriptions to indicate location on slope, canopy gap effects, proximity to water and other notable descriptive features were recorded in the four compass directions. Percent canopy cover was taken from plot center using a densiometer. The plots were relocated and all measurements were re-recorded using the same methodology from August to October of 2005. In addition, the geographical coordinates of the plots were recorded in June 2006 with a GPS to add spatial context to the study.
Tree species were identified by a local guide who was the resident expert on plant and tree species and taxonomic comparison to previous studies. Species were recorded by Malagasy name. Scientific names were then determined for the vernacular names by (i) referencing Schatz (2001); (ii) using previously documented (incomplete) species lists (
For all trees greater than 5cm in diameter at breast height (DBH), the following information was recorded: species identification, DBH, height and presence of qualitative health characteristics such as bole wounding, disease, rot evidence or strangling vines. All regeneration less than 5cm DBH was enumerated during both surveys, though the species were only listed during the 2005 plot survey. Finally, to obtain a sample of ground cover in the plot, a 1m λ 1m square mini-plot was randomly located within the plot and all species of groundcover and regeneration shorter than breast height were identified and recorded.

Location of Reserve Naturelle Integrale de (RNI) Betampona, the study site in Eastern Madagascar. Approximately 45km from the small port city of Toamasina midway up the East Coast of the island, RNI Betampona is one of the last vestiges of primary lowland rainforest in the region. Plot locations are indicated by black dots on the Reserve Map.
Data treatment
Following the field study and compilation of the tree species list for RNI Betampona, plot data were analyzed and compared over the two respective field seasons. Tree species stem count and stem area were compared both among plots within the Reserve and among other rainforest sites worldwide. Species and family dominance curves were drawn to delineate composition characteristics for RNI Betampona. Further, trees and regeneration counts were compiled and compared along <10cm, 10-30cm, ≥30cm diameter size classes to detect size differences in species composition. Changes in tree height with DBH were compared over the two study years to reveal forest structure characteristics and also to detect large-scale changes within the reserve. Plot-wide stem area (m2 ha−1), canopy cover (%) and groundcover (%) were evaluated for differences over the study years using ANOVA (Sokal & Rohlf 1981).
Species richness and abundance within the equation:
Importance Value Index (IVI) was calculated because it combines and quantifies the three commonly used vegetation-descriptors of abundance, frequency and dominance as an index. The Index values are unitless and total 300 for all RNI Betampona species.
To understand species diversity and evenness both among plots and throughout RNI Betampona as a whole, we used the Shannon-Weiner Indices. Calculated using the equation:
Significant differences in species diversity and evenness within plots and between years were revealed using Student's
Results
Species composition and importance
Within the 100 survey plots, a total of 244 tree species belonging to 49 families comprised the 2,847 stems ≥5cm measured and the 9,419 stems <5cm counted during the 2004 plot survey. However, in total 288 tree species were noted within the limits of RNI Betampona. This species number discrepancy occurred for two reasons. First, a number of species are known to exist in RNI Betampona but were not identified within the 100 vegetation survey plots. Secondly, some trees could only be identified to the genus level and though it was known that there was more than one species with the same Malagasy vernacular name, species could not be distinguished due to field limitation such as inability to collect leaves from tall trees. For instance, the tree known in Malagasy as ‘Famelona’ (
In 2005, 2,227 trees ≥5cm at DBH were measured and 5,728 stems were noted in the ≥5cm regeneration stem count. Stems per plot ranged from 12 to 52 for trees ≥5cm-DBH (mean = 28.47 per 78.54m2 plot or 3603.8 stems per hectare) and 22 to 224 for trees ≥5cm (mean = 94.19 per plot or 11,922.8 stems per hectare). These numbers decreased in 2005 when ≥5cm-DBH trees ranged from 12 to 38 stems per plot (mean 22.27 per plot or 2,818.99 per hectare) and 19 to 140 stems per plot (mean 57.28 stems per plot or 7250.63 stems per hectare) were recorded for stems ≥5cm-DBH per hectare. In addition, species per plot averages fell from 19.27 per plot in 2004 to 15.71 per plot in 2005. The overall trend in tree numbers follows dynamics seen in other rainforests worldwide [32, 33] where local thinning occurs following recovery from the formation of canopy gaps by disturbance. This inference is supported by an increase in the average DBH from 12.77cm to 13.50cm in the trees measured in 2004 to 2005. Also supporting the hypothesis that the forest is undergoing thinning and forest development, the average per plot stem area (m2/ha) decreased from 75.85m2/ha to 65.34m2/ha and average plot canopy cover (%) increased from 79% to 83% from 2004 to 2005, respectively.
Out of a total of 191 floral families found in Madagascar, 50 were measured in varying abundances within RNI Betampona survey plots (Fig. 2a). Species dominance across RNI Betampona, shown in Figure 2b above, follows the “broken-stick model” characteristic of dominance-diversity curve relationships found in other rainforests worldwide [34, 35]. However, the high stem abundances of the three most dominant species:

a shows the dominance of the tree families present in RNI Betampona listed as stem counts. Figure 2b is the inset showing the dominance diversity curves for both 2004 and 2005 trees measured in RNI Betampona. Tree abundance is shown on a logarithmic scale.
Results of the Importance Value Index values were calculated individually for 2004 and 2005 (Fig. 3). There was no significant difference among the most important species in RNI Betampona. Of the 192 tree species included in the IVI calculation, 118 species were among the top 95% of Importance Values. The most important species included:
The Euphorbiaceae Family was found to be the most important family, with a combined Importance Value of 39.58 among its 11 species, accounting for 13.19% of the overall IVI. Both the first (
The total stem area for

Graph depicting results of the Importance Value Index (IVI) analysis showing 95% Importance of RNI Betampona Species. Top six species are labeled. Notable tree species types (palms, pandans, leguminous species and arborescent ferns are shown in light grey, black, textured and white, respectively.
The nine true palm and one palm-like species identified in RNI Betampona accounted for 9.84% of the IVI, with a combined value of 29.51 (true palms accounted for 4.39% and 13.18 respectively). The palm-like
As noted by Goodman [16], Madagascar lowland rainforests are known for their high abundance and diversity of palms, pandans and tree fern species. In the RNI Betampona survey plots, tree ferns (
Plot level diversity
To quantify the diversity of species occurring in RNI Betampona plots, Shannon-Weiner (S-W) Indices were calculated for each survey plot for the 2005 dataset. As stated by Kent and Coker [29], values of the index usually lie between 1.5 and 3.5, with some exceptional cases exceeding 4.5. When tree species abundances were amassed into one RNI Betampona-wide dataset, the resultant S-W Index value of 4.466 indicated RNI Betampona species diversity overall is extremely high, with an associated evenness of 0.884. Results comparing diversity between plots indicated that within plot diversity varied from 1.609 in plot 100 (P100) to 3.226 in P013, with a plot-wide mean of 2.581 and evenness of 0.947 (Table 1). Diversity and evenness were further compared by height class and diameter class in order to investigate patterns occurring at different canopy strata and girth sizes. Results by height class indicate a strong decrease in diversity and increase in evenness from sub-canopy to super-canopy trees.
Results of the Shannon-Weiner diversity Index calculations for: a) RNI Betampona survey plots, including all plots calculated together, the least and most diverse plots and a plot-wide average b) tree species divided into height class and c) tree species divided into diameter classes. Evenness, number of species and stem counts are included.
To further compare patterns of diversity in RNI Betampona, tree species abundances were divided into diameter-size classes, and S-W Index and Evenness values were calculated. As with the height class comparison, results indicated decreasing diversity index values with increasing tree diameter, with a smaller range of 3.051 to 4.255 as compared to that of the height class investigation, which ranged from 2.452 to 4.385 (Table 1). These findings are similar to that of Newberry and others [30] who showed a similar trend of decreasing diversity with increasing girth size in their 1992 study of a Dipterocarp forest in Sabah, Malaysia. However, in their study, evenness increased slightly along the small to large diameter gradient (0.75–0.86). Our calculations however, showed a patternless fluctuation of evenness along the size gradient with small range (0.828 to 0.895) and an average 0.871. This fluctuation was despite a large decrease in both stem count and species number along the size gradient from small to large trees.
The smaller depth in variability of S-W diversity index values over the diameter class gradient along with the fluctuation in evenness suggests that height plays a greater role in constraining species than the diameter classes assigned by this study. This inference was upheld by both quantitative and qualitative observations made during the field survey. Tree diameters in RNI Betampona were found to be smaller overall than those described in other lowland rainforests worldwide, a feature also noted by Grubb [23]. Qualitatively, it was quite common for a tall canopy dominant tree to have the same diameter as a sub-canopy tree that was half as tall.
Forest structure and density
Analyses of variance (1-way ANOVA) of canopy coverage (%), basal area (m2/ha), and groundcover (%) between plots for each year showed significant among-plot variation for these variables for 2004 and 2005 (p<0.0001). Further, Student's
Summary of results per plot comparison of stem count, species count, regeneration stem count, basal area (m2/ha), canopy cover (%) ground cover (%), diameter at breast height (cm) and height (m) values for 2004 and 2005 survey years. Average, minimum and maximum diameter growth increment (cm/year) and height growth increment (m/year) are also reported plot-wide.
The average DBH (cm) of trees >5cm within the survey plots also increased from 12.96cm in 2004 to 13.45cm in 2005, though the range stayed the same (5.00cm to 97.50cm). A two-tailed paired
Comparison to other rainforests worldwide
Comparing the 244 tree species sampled in this study in RNI Betampona to those sampled in other rainforests worldwide with study areas of similar size (Table 3) further highlights the significant levels of species diversity found in Madagascar's lowland rainforest. The number of species is closest to that of Yanomamo, Peru, where 292 species were found in a one-hectare forest plot, as reported by Whitmore [36]. Species numbers were also similar to rainforests in Pasoh, Malaysia [38] and Kalimantan, Indonesia [36], though the latter study area was twice that of the
Results comparing species number for RNI Betampona, Madagascar as compared to other rainforest study sites of similar size worldwide.
Whitmore (1990)
Duivenvoorden (1996)
Kochummen et al. (1990)
Kartawinata et al. (1981)
Species endemism and diversity of Madagascar's biota have been explained by 165 million years of separation from mainland Africa, resulting in an independent evolutionary history on the island [1, 12, 16, 39]. The more recent separation from the Indian continent (
Discussion
The findings of this study are the first undertaking of a comprehensive tree species inventory recorded for lowland rainforest in this region of Madagascar. A total of 244 tree species belonging to 49 families comprised the 2,847 stems ≥5cm measured and the 9,419 stems <5cm counted during the 2004 plot survey. In 2005, 2,227 trees ≥5cm were measured and 5,728 stems (of 135 species) were noted in the <5cm regeneration stem count. This trend follows dynamics seen in other rainforests worldwide [32, 33] where local thinning occurs following recovery from the formation of canopy gaps by disturbance. This inference is supported by an increase in the average DBH in the trees measured as well as total plot basal area and average canopy cover (%) from 2004 to 2005. Family dominance across RNI Betampona follows expected dominance diversity curve behavior for rainforests worldwide (Figure 2).
Whereas in many Asian lowland rainforests dominant tree species belong to the
Results of the Importance Value Index were calculated for 2004 and 2005 (Figure 3) and showed no significant difference among the most important species in RNI Betampona. Of the 192 tree species included in the IVI calculation, 118 species were among the top 95% of importance values. The seven most important species included two
The significant variability of the tree species diversity and evenness among Betampona plots suggests a mosaic patterning of species distribution in RNI Betampona. An examination of diversity by height class indicated a strong decrease in diversity and increase in evenness from sub-canopy to super-canopy trees. This finding supports Whitmore's [32] assertion that species diversity decreases with increasing elevation within in the forest canopy and is highest among the regeneration as this canopy layer is a combination of larger tree species competing for canopy dominance and small sub-canopy trees already at their maximum height. The fact that species number and stem count both decrease with increasing height class confirms successful competitive strategies for a few canopy dominant species in RNI Betampona, rather than a random occurrence of the achievement of canopy dominance by many species.
Tree species abundances were also divided into diameter size classes and S-W Index and Evenness values were calculated. Results also indicated decreasing diversity index values with increasing tree diameter but with a smaller range compared to that of the height class investigation (Table 1). These findings are similar to those of Newberry and others [30], who showed a similar trend of decreasing diversity with increasing girth size in their 1992 study of a Dipterocarp forest in Sabah, Malaysia. The smaller depth in variability of S-W diversity index values over the diameter class gradient, along with the fluctuation in evenness, suggests that height plays a greater role in constraining species than the diameter classes assigned by this study. This inference was upheld by both quantitative and qualitative observations made in during the field survey. Tree diameters in RNI Betampona were found to be smaller overall than those described in other lowland rainforests worldwide, a feature also noted by Grubb [23]. Qualitatively, it was quite common for a tall canopy dominant tree to have the same diameter as a sub-canopy tree that was half as tall.
Statistical testing of each measured variable within the survey plots comparing sampling years indicated that there were no differences in canopy cover, basal area or groundcover between 2004 and 2005. The increasing trend of these three variables taken with the decrease of >5cm tree stem count and regeneration stem counts from 2004 to 2005 is further evidence of a forest undergoing thinning. The average size of trees (DBH (cm) and height (m)) within the survey plots also increased over the study years, providing evidence of thinning occurring within the forest.

Clockwise from left right: A typical first order stream in primary forest with moss covered rocks and epiphytes, a forest clearing made by an old landslide off the western ridge of the main crest trail, the main crest trail in RNI Betampona and a canopy emergent species in the genus
Implications for conservation
A significant challenge for the scientific community over the past few decades has been how to quantify the biomass that exists in remote forested regions and measure the effect of change where there is a lack of baseline data. With the development and testing of new conservation measures such as carbon (C) finance mechanisms to reduce greenhouse gas (GHG) emissions and conserve biodiversity in the forested areas across the planet, the need for monitoring and understanding these remote forested regions will only increase. Madagascar is one such place. With levels of biodiversity that are among the highest worldwide, the island is in many ways on the verge of ecological collapse [1, 2, 8, 16, 19
Conserving biological diversity in Madagascar has become an issue of increasing priority and urgency within the international scientific and policy communities in recent years. Expanding human population combined with the continuing practice of slash and burn clearing as an agricultural technique are two associated factors in the destruction and fragmentation of the remaining forest habitats on the island. Madagascar has lost over 90% of its original rainforest, damage that is in many cases irreversible [12] and has resulted in Madagascar being considered one of the world's most threatened hotspots for terrestrial biodiversity [18]. Given the rapid rate at which the lowland rainforests in particular are being fragmented and consumed, it is projected that there will be no primary forest left outside of protected reserves by the year 2020 [16]. However, this may become a reality sooner as the anthropogenic pressure on the flora and fauna as well as on the resources that sustain them has been been on the rise due to lack of conservation enforcement since the government coup in early 2009 [41–44].
Efforts to conserve Madagascar rainforest were initiated in the 1990s but became more large-scale in the early 2000s at both local and international levels in an attempt to save what is left of these unique ecosystems. A key element in development of an appropriate management system to protect and maintain Malagasy rainforests is a comprehensive knowledge base of information about structure and function of the forest ecosystem. This has thus far been a challenge for conservation planners and the scientific community due to both the lack of infrastructure and the difficulty of accessing primary lowland rainforest. Additionally, this lack of accessibility has resulted in much of the reported research being in less comprehensive, descriptive phases.
Equally important in our understanding of how best to manage and conserve Madagascar's remaining rainforests is an understanding of the dynamic relationships among endemic flora and fauna at the ecosystem level. Comprehensive ecosystem studies that include species inventories, structure, growth, diversity information, and comparisons to other rainforests worldwide provide a foundation for future research. In addition, the publication of this research provides a basis for comparison to future studies using wider-scope, cutting-edge techniques such as remote sensing of forest extent, 3D structure imaging, and ground-truthing of forest-wide biomass estimates essential to economic incentive-driven conservation approaches, such as that of the UNFCCC's Agreement on Reduced Emissions from Deforestation and Degradation (REDD+) [45] and the UN-REDD† programs.
Footnotes
Acknowledgments
We would like to thank field assistants Charles Armstrong, Chris Santijanna, and Lalatahiana ‘Lala’ Davy Randriatavy and Tahiana Andriaharimalala of the University of Antanananarivo, Madagascar. We would also like to thank Karen Freeman of the Madagascar Fauna Group for and Natasha Ribeiro for technical support and advice on this project. We would like to thank Charlie Armstrong for the editing of the drafts of this manuscript. Funding for this project was provided by the Center for Regional Environmental Studies at the University of Virginia, the Explorer's Club of Washington DC.
*
The genus
†
UN-REDD stands for The United Nations Collaborative Programme on Reducing Emissions from Deforestation and Forest Degradation in Developing Countries.
