This function models the relationship between quantitative trait and the genotype of a person. It introduces a new syntax for model specification, which is necessary because when phase is unknown, the explanatory variables for the linear regression are never observed. The data must be a population-based sample because within family effects are not modeled.
ManderA. P.2001a. Haplotype analysis in population-based association studies. Stata Journal (1)1: 58–75.
2.
ManderA. P.2001b. Population-based quantitative trait haplotype analysis using an algorithm to resolve phase. Submitted.
3.
ManderA. P.2001c. sbe38: Haplotype frequency estimation using an EM algorithm and log-linear modeling. Stata Technical Bulletin57: 5–7. vol. 10, 104–107. College Station, TX: Stata Press.
