Discussion of ‘Statistical contributions to bioinformatics’ by Morris and Baladandayuthapani

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References

Altschul

Gish

Miller

Myers

Lipman

(1990) Basic local alignment search tool. Journal of Molecular Biology , 215, 403–10.

Bacher

Kendziorski

(2016) Design and computational analysis of single-cell RNA-sequencing experiments. Genome Biology , 17, 63.

Benson

Clark

Karsch-Mizrachi

Lipman

Ostell

Sayers

(2015) GenBank. Nucleic Acids Research , 43, D30–D35.

Durbin

Eddy

Krogh

Mitchison

(1998) Biological Sequence Analysis Probabilistic Models of Proteins and Nucleic Acids . Cambridge: Cambridge University Press.

Feng

Zhang

Ying

Wang

(2015) Nanopore-based fourth-generation DNA sequencing technology. Genomics, Proteomics and Bioinformatics , 13, 4–16.

Hao

Wang

Craven

Newton

Ahlquist

(2013) Limited agreement of independent RNAi screens for virus-required host genes owes more to false-negative than false-positive factors. PLoS Computational Biology , 9, e1003235.

Lawrence

Altschul

Boguski

Liu

Neuwald

Wootton

(1993) Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment. Science , 262, 208–14.

Lawrence

Reilly

(1990) An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences, Proteins , 7, 41–51.

Leng

Chu

Barry

Choi

Jiang

Stewart

Thomson

Kendziorski

(2015) Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments. Nature Methods , 12, 947–50.

10.

MacKay

Chen

(2014) Biosensor systems and applications in genomics, proteomics and metabolomics: A review. In 2014 IEEE International Symposium on Circuits and Systems (ISCAS), pages 217–20. IEEE.

11.

Mathelier

Wasserman

(2013) The next generation of transcription factor binding site prediction. PLoS Computational Biology , 9, e1003214.