Influenza A viruses infect large numbers of warm-blooded animals, including wild birds, domestic birds, pigs, horses, and humans. Influenza viruses can switch hosts to form new lineages in novel hosts. The most significant of these events is the emergence of antigenically novel influenza A viruses in humans, leading to pandemics. Influenza pandemics have been reported for at least 500 years, with inter-pandemic intervals averaging approximately 40 years.
TaubenbergerJKHultinJVMorensDM. Discovery and characterization of the 1918 pandemic influenza virus in historical context. Antivir Ther2007;12(4 Pt B):581–91.
3.
TaubenbergerJKMorensDM. 1918 Influenza: The mother of all pandemics. Emerg Infect Dis2006;12:15–22.
4.
TaubenbergerJKReidAHFanningTG. Capturing a killer flu virus. Sci Am2005;292:48–57.
5.
GartenRJDavisCTRussellCAShuBLindstromSBalishA. Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans. Science2009;325:197–201.
6.
WebsterRGGovorkovaEA. H5N1 influenza–continuing evolution and spread. N Engl J Med2006;355:2174–7.
7.
HirschA. Handbook of geographical and historical pathology. London: New Sydenham Society; 1883.
8.
TaubenbergerJKMorensDM. Pandemic influenza—including a risk assessment of H5N1. Rev Sci Tech2009;28:187–202.
9.
CoxNJSubbaraoK. Global epidemiology of influenza: Past and present. Annu Rev Med2000;51:407–21.
10.
BeveridgeW. Influenza: The last great plague, an unfinished story. New York: Prodist; 1977.
11.
SimonsenL. The global impact of influenza on morbidity and mortality. Vaccine1999;17Suppl 1:S3–10.
12.
MorensDMFauciAS. The 1918 influenza pandemic: Insights for the 21st century. J Infect Dis2007;195:1018–28.
13.
MorensDMTaubenbergerJKFauciAS. The persistent legacy of the 1918 influenza virus. N Engl J Med2009;361:225–9.
14.
JohnsonNPMuellerJ. Updating the accounts: Global mortality of the 1918–1920 “Spanish” influenza pandemic. Bull Hist Med2002;76:105–15.
ChenHSmithGJLiKSWangJFanXHRaynerJM. Establishment of multiple sublineages of H5N1 influenza virus in Asia: Implications for pandemic control. Proc Natl Acad Sci USA2006;103:2845–50.
18.
WebsterRGPeirisMChenHGuanY. H5N1 outbreaks and enzootic influenza. Emerg Infect Dis2006;12:3–8.
WebsterRGHulse-PostDJSturm-RamirezKMGuanYPeirisMSmithG. Changing epidemiology and ecology of highly pathogenic avian H5N1 influenza viruses. Avian Dis2007;51(1 Suppl):269–72.
21.
MostGF. Influenza Europaea, oder die Größeste KrankheitsEpidemie der neuern ZeitHamburg: Perthes und Besser; 1820.
22.
ShopeRE. Swine influenza. I. Experimental transmission and pathology. J Exp Med1931;54:349–59.
23.
LewisPAShopeRE. Swine influenza: II. A hemophilic bacillus from the respiratory tract of infected swine. J Exp Med1931;54:361–71.
24.
ShopeRE. Swine influenza. III. Filtration experiments and etiology. J Exp Med1931;54:373–85.
25.
ChunJ. Influenza including its infection among pigs. Natl Med J1919–1920;5:34–44.
26.
KoenJ. A practical method for field diagnosis of swine diseases. Am J Vet Med1919;14:468–70.
27.
TaubenbergerJKReidAHJanczewskiTAFanningTG. Integrating historical, clinical and molecular genetic data in order to explain the origin and virulence of the 1918 Spanish influenza virus. Philos Trans R Soc Lond B Biol Sci2001;356:1829–39.
28.
DunhamEJDuganVGKaserEKPerkinsSEBrownIHHolmesEC. Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses. J Virol2009;83:5485–94.
29.
DochezAMillsKKneelandY. Studies of the etiology of influenza. Proc Soc Exp Biol Med1934–1935;30:1017–22.
30.
SmithWAndrewesCLaidlawP. A virus obtained from influenza patients. Lancet1933;2:66–8.
31.
PalesePShawML. Orthomyxoviridae: The viruses and their replication. In: KnipeDMHowleyPM, editors. Fields virology. 5th ed.Philadelphia: Lippincott, Williams & Wilkins; 2007. p. 1647–90.
32.
WebsterRGBeanWJGormanOTChambersTMKawaokaY. Evolution and ecology of influenza A viruses. Microbiol Rev1992;56:152–79.
33.
DuganVGChenRSpiroDJSengamalayNZaborskyJGhedinE. The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathog2008;4:e1000076.
WrightPFNeumannGKawaokaY. Orthomyxoviruses. In: KnipeDMHowleyPM, editors. Fields virology. 5th ed.Philadelphia: Lippincott Williams & Wilkins; 2007. p. 1691–740.
36.
ObenauerJCDensonJMehtaPKSuXMukatiraSFinkelsteinDB. Large-scale sequence analysis of avian influenza isolates. Science2006;311:1576–80.
37.
ScholtissekCRohdeWVon HoyningenVRottR. On the origin of the human influenza virus subtypes H2N2 and H3N2. Virology1978;87:13–20.
38.
KawaokaYKraussSWebsterRG. Avian-to-human transmission of the PB1 gene of influenza A viruses in the 1957 and 1968 pandemics. J Virol1989;63:4603–8.
39.
ReidAHTaubenbergerJKFanningTG. Evidence of an absence: The genetic origins of the 1918 pandemic influenza virus. Natl Rev Microbiol2004;2:909–14.
40.
TaubenbergerJKReidAHLourensRMWangRJinGFanningTG. Characterization of the 1918 influenza virus polymerase genes. Nature2005;437:889–93.
41.
RabadanRLevineAJRobinsH. Comparison of avian and human influenza A viruses reveals a mutational bias on the viral genomes. J Virol2006;80:11887–91.
42.
TaubenbergerJKMorensDMFauciAS. The next influenza pandemic: Can it be predicted?JAMA2007;297:2025–7.
43.
GaydosJCTopFHJr.HodderRARussellPK. Swine influenza A outbreak, Fort Dix, New Jersey, 1976. Emerg Infect Dis2006;12:23–8.
44.
SencerDJMillarJD. Reflections on the 1976 swine flu vaccination program. Emerg Infect Dis2006;12:29–33.
45.
FouchierRASchneebergerPMRozendaalFWBroekmanJMKeminkSAMunsterV. Avian influenza A virus (H7N7) associated with human conjunctivitis and a fatal case of acute respiratory distress syndrome. Proc Natl Acad Sci USA2004;101:1356–61.
46.
UngchusakKAuewarakulPDowellSFKitphatiRAuwanitWPuthavathanaP. Probable person-to-person transmission of avian influenza A (H5N1). N Engl J Med2005;352:333–40.
47.
MorensDMTaubenbergerJKFauciAS. Predominant role of bacterial pneumonia as a cause of death in pandemic influenza: Implications for pandemic influenza preparedness. J Infect Dis2008;198:962–70.
JordanEO. Epidemic influenza: A survey. Chicago: American Medical Association; 1927.
50.
KuikenTTaubenbergerJK. The pathology of human influenza revisited. Vaccine2008;26(Suppl 4):D59–66.
51.
TaubenbergerJKMorensDM. The pathology of influenza virus infections. Ann Rev Pathol2008;3:499–522.
52.
TumpeyTMBaslerCFAguilarPVZengHSolorzanoASwayneDE. Characterization of the reconstructed 1918 Spanish influenza pandemic virus. Science2005;310:77–80.
53.
KashJCTumpeyTMProllSCCarterVPerwitasariOThomasMJ. Genomic analysis of increased host immune and cell death responses induced by 1918 influenza virus. Nature2006;443:578–81.
54.
LangmuirADSerflingREShermannILDauerCC, Epidemiology Branch CDC. The epidemiology of Asian influenza 1957–1960: A descriptive brochure. Washington: Department of Health, Education, and Welfare, Public Health Service, Communicable Disease Center (US); 1960.
55.
KilbourneED. Perspectives on pandemics: A research agenda. J Infect Dis1997;176Suppl 1:S29–31.
56.
KilbourneEDPokornyBAJohanssonBBrettIMilevYMatthewsJT. Protection of mice with recombinant influenza virus neuraminidase. J Infect Dis2004;189:459–61.
57.
Outbreak of swine-origin influenza A (H1N1) virus infection—Mexico, March-April 2009. MMWR Morb Mortal Wkly Rep2009;58(Dispatch):1–3.
58.
Perez-PadillaRde la Rosa-ZamboniDde LeonS PonceHernandezMQuinones-FalconiFBautistaE. Pneumonia and respiratory failure from swine-origin influenza A (H1N1) in Mexico. N Engl J Med2009;361:680–9.
59.
FraserCDonnellyCACauchemezSHanageWPVan KerkhoveMDHollingsworthTD. Pandemic potential of a strain of influenza A (H1N1): Early fndings. Science2009;324:1557–61.
60.
SmithGJVijaykrishnaDBahlJLycettSJWorobeyMPybusOG. Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature2009;459:1122–5.
61.
ChowellGBertozziSMColcheroMALopez-GatellHAlpuche-ArandaCHernandezM. Severe respiratory disease concurrent with the circulation of H1N1 influenza. N Engl J Med2009;361:674–9.
62.
DawoodFSJainSFinelliLShawMWLindstromSGartenRJ. Emergence of a novel swine-origin influenza A (H1N1) virus in humans. N Engl J Med2009;360:2605–15.
63.
Centers for Disease Control and Prevention (US). CDC estimates of 2009 H1N1 influenza cases, hospitalizations and deaths in the United States, April 2009–January 16, 2010 [cited 2010 Mar 21]. Available from: http://www.cdc.gov/h1n1flu/estimates/April_January_16.htm.
64.
Editor. Occurence of epidemic influenza in cycles. JAMA1931;96:711.
65.
AlexanderDJ. Avian influenza viruses and human health. Dev Biol (Basel)2006;124:77–84.
66.
TweedSASkowronskiDMDavidSTLarderAPetricMLeesW. Human illness from avian influenza H7N3, British Columbia. Emerg Infect Dis2004;10:2196–9.
67.
ChoiYKOzakiHWebbyRJWebsterRGPeirisJSPoonL. Continuing evolution of H9N2 influenza viruses in Southeastern China. J Virol2004;78:8609–14.
68.
MatrosovichMNKraussSWebsterRG. H9N2 influenza A viruses from poultry in Asia have human virus-like receptor specificity. Virology2001;281:156–62.
69.
Sturm-RamirezKMHulse-PostDJGovorkovaEAHumberdJSeilerPPuthavathanaP. Are ducks contributing to the endemicity of highly pathogenic H5N1 influenza virus in Asia?J Virol2005;79:11269–79.
70.
MainesTRChenLMMatsuokaYChenHRoweTOrtinJ. Lack of transmission of H5N1 avian-human reassortant influenza viruses in a ferret model. Proc Natl Acad Sci USA2006;103:12121–6.
71.
TaubenbergerJK. Influenza hemagglutinin attachment to target cells: “birds do it, we do it …”Future Virol2006;1:415–8.
72.
ThompsonWWShayDKWeintraubEBrammerLCoxNAndersonLJ. Mortality associated with influenza and respiratory syncytial virus in the United States. JAMA2003;289:179–86.
73.
HolmesECGhedinEMillerNTaylorJBaoYSt GeorgeK. Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses. PLoS Biol2005;3:e300.
74.
NelsonMIViboudCSimonsenLBennettRTGriesemerSBSt GeorgeK. Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918. PLoS Pathog2008;4:e1000012.
75.
RambautAPybusOGNelsonMIViboudCTaubenbergerJKHolmesEC. The genomic and epidemiological dynamics of human influenza A virus. Nature2008;453:615–9.
76.
LeQMKisoMSomeyaKSakaiYTNguyenTHNguyenKH. Avian flu: Isolation of drug-resistant H5N1 virus. Nature2005;437:1108.
77.
GerhardWMozdzanowskaKZharikovaD. Prospects for universal influenza virus vaccine. Emerg Infect Dis2006;12:569–74.
78.
MemoliMJMorensDMTaubenbergerJK. Pandemic and seasonal influenza: Therapeutic challenges. Drug Discov Today2008;13:590–5.
79.
MarkelHLipmanHBNavarroJASloanAMichalsenJRSternAM. Nonpharmaceutical interventions implemented by US cities during the 1918–1919 influenza pandemic. JAMA2007;298:644–54.
80.
HalloranMEFergusonNMEubankSLonginiIMJrCummingsDALewisB. Modeling targeted layered containment of an influenza pandemic in the United States. Proc Natl Acad Sci USA2008;105:4639–44.
81.
MontoAS. The risk of seasonal and pandemic influenza: Prospects for control. Clin Infect Dis2009;48Suppl 1:S20–5.
82.
DharanNJGubarevaLVMeyerJJOkomo-AdhiamboMMcClintonRCMarshallSA. Infections with oseltamivir-resistant influenza A(H1N1) virus in the United States. JAMA2009;301:1034–41.
83.
LayneSPMontoASTaubenbergerJK. Pandemic influenza: An inconvenient mutation. Science2009;323:1560–1.
HolmesECTaubenbergerJKGrenfellBT. Heading off an influenza pandemic. Science2005;309:989.
87.
BarryJM. Pandemics: Avoiding the mistakes of 1918. Nature2009;459:324–5.
88.
SubbaraoKMurphyBRFauciAS. Development of effective vaccines against pandemic influenza. Immunity2006;24:5–9.
89.
ThrosbyMvan den BrinkEJongeneelenMPoonLLAlardPCornelissenL. Heterosubtypic neutralizing monoclonal antibodies cross-protective against H5N1 and H1N1 recovered from human IgM+ memory B cells. PLoS One2008;3:e3942.
90.
YoshidaRIgarashiMOzakiHKishidaNTomabechiDKidaH. Cross-protective potential of a novel monoclonal antibody directed against antigenic site B of the hemagglutinin of influenza A viruses. PLoS Pathog2009;5:e1000350.