ToomerGJ.Ptolemy's Almagest. Princeton University Press: Princeton, NJ; 1998.
2.
MarchantJ. First known map of night sky found hidden in Medieval parchment. Nature, 2022;(610):613–614; doi: 10.1038/d41586-022-03296-1
3.
ZhaoY, CoelhoC, HughesAL, et al.Debugging and consolidating multiple synthetic chromosomes reveals combinatorial genetic interactions. Cell, 2023; 186(24):5220–5236.e16; doi: 10.1016/j.cell.2023.09.025
4.
LauerS, LuoJ, Lazar-StefanitaL, et al.Context-dependent neocentromere activity in synthetic yeast chromosome VIII. Cell Genomics, 2023; 3(11):100437; doi: 10.1016/j.xgen.2023.100437
5.
McCullochLH, SambasivamV, HughesAL, et al.Consequences of a telomerase-related fitness defect and chromosome substitution technology in yeast synIX strains. Cell Genomics, 2023; 3(11):100419; doi: 10.1016/j.xgen.2023.100419
6.
ShenY, GaoF, WangY, et al.Dissecting aneuploidy phenotypes by constructing Sc2.0 chromosome VII and SCRaMbLEing synthetic disomic yeast. Cell Genomics, 2023; 3(11):100364; doi: 10.1016/j.xgen.2023.100364
7.
BlountBA, LuX, DriessenMRM, et al.Synthetic yeast chromosome XI design provides a testbed for the study of extrachromosomal circular DNA dynamics. Cell Genomics, 2023; 3(11):100418; doi: 10.1016/j.xgen.2023.100418
8.
SchindlerD, WalkerRSK, JiangS, et al.Design, construction, and functional characterization of a tRNA neochromosome in yeast. Cell, 2023; 186(24):5237–5253.e22; doi: 10.1016/j.cell.2023.10.015
9.
WilliamsTC, KroukampH, XuX, et al.Parallel laboratory evolution and rational debugging reveal genomic plasticity to S. cerevisiae synthetic chromosome XIV defects. Cell Genomics, 2023; 3(11):100379; doi: 10.1016/j.xgen.2023.100379
10.
FooJL, KitanoS, SusantoAV, et al.Establishing chromosomal design-build-test-learn through a synthetic chromosome and its combinatorial reconfiguration. Cell Genomics, 2023; 3(11):100435; doi: 10.1016/j.xgen.2023.100435
11.
LuoJ, Vale-SilvaLA, RaghavanAR, et al.Synthetic chromosome fusion: Effects on mitotic and meiotic genome structure and function. Cell Genomics, 2023; 3(11):100439; doi: 10.1016/j.xgen.2023.100439
12.
ZhangW, Lazar-StefanitaL, YamashitaH, et al.Manipulating the 3D organization of the largest synthetic yeast chromosome. Mol Cell, 2023; In Press; doi: 10.1016/j.molcel.2023.10.015
13.
RichardsonSM, MitchellLA, StracquadanioG, et al.Design of a synthetic yeast genome. Science (80-), 2017; 355(6329):1040–1044; doi: 10.1126/science.aaf4557
14.
NicholsonDJ. Is the cell really a machine?. J Theor Biol, 2019; 477:108–126; doi: 10.1016/j.jtbi.2019.06.002
15.
PorcarM, PeretóJ. Nature versus design: Synthetic biology or how to build a biological non-machine. Integr Biol, 2016; 8(4):451–455; doi: 10.1039/C5IB00239G
16.
LiuH, JefferyCJ. Moonlighting proteins in the fuzzy logic of cellular metabolism. Molecules, 2020; 25(15):3440; doi: 10.3390/molecules25153440
17.
DavidA, IslamS, TankhilevichE, et al.The AlphaFold Database of protein structures: A biologist's guide. J Mol Biol, 2022; 434(2):167336; doi: 10.1016/j.jmb.2021.167336
18.
FudenbergG, GetzG, MeyersonM, et al.High order chromatin architecture shapes the landscape of chromosomal alterations in cancer. Nat Biotechnol, 2011; 29:1109–1113; doi: 10.1038/nbt.2049
19.
HniszD, WeintraubAS, DayDS, et al.Activation of proto-oncogenes by disruption of chromosome neighborhoods. Science, 2016; 351:1454–1458; doi: 10.1126/science.aad9024
20.
LupiáñezDG, KraftK, HeinrichV, et al.Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions. Cell, 2015; 161:1012–1025; doi: 10.1016/j.cell.2015.04.004
21.
XuJ, SongF, LyuH, et al.Subtype-specific 3D genome alteration in acute myeloid leukaemia. Nature, 2022; 611(7935):387–398; doi: 10.1038/s41586-022-05365-x
22.
KragesteenBK, SpielmannM, PaliouC, et al.Dynamic 3D chromatin architecture contributes to enhancer specificity and limb morphogenesis. Nat Genet, 2018; 50(10):1463–1473; doi: 10.1038/s41588-018-0221-x
23.
StofanE. Hubble's successor, at last. Science (80-), 2021; 374(6572):1175; doi: 10.1126/science.abn3947
24.
Ollé-VilaA, Duran-NebredaS, Conde-PueyoN, et al.A morphospace for synthetic organs and organoids: the possible and the actual. Integr Biol (Camb), 2016; 8(4):485–503; doi: 10.1039/c5ib00324e