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Research article

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The MASH Pipeline for Protein Function Prediction and an Algorithm for the Geometric Refinement of 3D Motifs

Brian Y. Chen, Viacheslav Y. Fofanov, Drew H. Bryant [...]

Journal of Computational Biology

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Research article

First published 2008-5

GASCO: Genetic Algorithm Simulation for Codon Optimization

Kuljeet Singh Sandhu, Sunil Pandey, Souvik Maiti [...]

In Silico Biology

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Research article

First published 2025-9

Automatic theme and motif identification in large-scale English literary corpora using deep learning approaches

Dandan Yang

Journal of Computational Methods in Sciences and Engineering

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Research article

First published 2001-06

Tsukuba BB: A Branch and Bound Algorithm for Local Multiple Alignment of DNA and Protein Sequences

Paul Horton

Journal of Computational Biology

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Research article

First published 2001-10

CpG Motif Identification for Veterinary and Laboratory Species Demonstrates That Sequence Recognition Is Highly Conserved

Robert Rankin, Reno Pontarollo, Xenia Ioannou [...]

Nucleic Acid Therapeutics

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Research article

First published 2006-09

Immunostimulatory PyNTTTTGT Oligodeoxynucleotides: Structural Properties and Refinement of the Active Motif

Juan M. Rodriguez, Fernanda Elías, Juan Fló [...]

Nucleic Acid Therapeutics

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Research article

First published 2009-05

Conditional Graphical Models for Protein Structural Motif Recognition

Yan Liu, Jaime Carbonell, Vanathi Gopalakrishnan [...]

Journal of Computational Biology

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Other

First published 2008-6

The Computational Detection of Functional Nucleotide Sequence Motifs in the Coding Regions of Organisms

Harlan Robins, Michael Krasnitz, Arnold J. Levine

Experimental Biology and Medicine

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Research article

First published 2002-06

Antitumor Mechanisms of Oligodeoxynucleotides with CpG and PolyG Motifs in Murine Prostate Cancer Cells: Decrease of NF- κ B and AP-1 Binding Activities and Induction of Apoptosis

Weiyin Shen, Marianella Waldschmidt, Xiuqin Zhao [...]

Nucleic Acid Therapeutics

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Research article

First published 2007-5

Prediction of structures and related properties of silicon clusters

Marta B. Ferraro

Journal of Computational Methods in Sciences and Engineering

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