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Open access

Research article

First published 2015

Quality Assessment of Domesticated Animal Genome Assemblies

Stefan E. Seemann, Christian Anthon, Oana Palasca [...]

Bioinformatics and Biology Insights

Retricted access

Research article

First published 2004-08

A Preprocessor for Shotgun Assembly of Large Genomes

Michael Roberts, Brian R. Hunt, James A. Yorke [...]

Journal of Computational Biology

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Research article

First published 2009-08

Maximum Likelihood Genome Assembly

Paul Medvedev, Michael Brudno

Journal of Computational Biology

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Research article

First published 2015-06

dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes

Yana Safonova, Anton Bankevich, Pavel A. Pevzner

Journal of Computational Biology

Retricted access

Research article

First published 2018-02

MELC Genomics: A Framework for De Novo Genome Assembly

Evaldo Bezerra Costa

Journal of Computational Biology

Open access

Research article

First published 2018

A Comprehensive Study of De Novo Genome Assemblers: Current Challenges and Future Prospective

Abdul Rafay Khan, Muhammad Tariq Pervez, Masroor Ellahi Babar [...]

Evolutionary Bioinformatics

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Research article

First published 2012-05

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov [...]

Journal of Computational Biology

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Research article

First published 2022-12

BigDNA: Primer Design Software for Overlap-Based Assembly of Phage Genomes and Larger DNAs

Ivan Vuong, Catherine M. Mageeney, Kelly P. Williams

PHAGE: Therapy,Applications,and Research

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Research article

First published 2013-04

Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome Assembly

Son K. Pham, Dmitry Antipov, Alexander Sirotkin [...]

Journal of Computational Biology

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Research article

First published 2013-10

Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products

Sergey Nurk, Anton Bankevich, Dmitry Antipov [...]

Journal of Computational Biology

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