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Research article

First published 2009-06

Modeling Signal Transduction in Enzyme Cascades with the Concept of Elementary Flux Modes

Jörn Behre, Stefan Schuster

Journal of Computational Biology

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Research article

First published 2010-02

On Algebraic Properties of Extreme Pathways in Metabolic Networks

Dimitrije Jevremovic, Cong T. Trinh, Friedrich Srienc [...]

Journal of Computational Biology

Free access

Research article

First published 2007-2

Elementary Mode Analysis to Study the Preculturing Effect on the Metabolic State of Lactobacillus rhamnosus During Growth on Mixed Substrates

Kalyan Gayen, Manish Gupta, Kareenhalli V. Venkatesh

In Silico Biology

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Research article

First published

Exploiting stoichiometric redundancies for computational efficiency and network reduction

Brian P. Ingalls, Eric Bembenek

In Silico Biology

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Research article

First published 2015-05

Fast Flux Module Detection Using Matroid Theory

Arne C. Reimers, Frank J. Bruggeman, Brett G. Olivier [...]

Journal of Computational Biology

Open access

Research article

First published 2012

Analyzing Thiol-Dependent Redox Networks in the Presence of Methylene Blue and Other Antimalarial Agents with RT-PCR-Supported in silico Modeling

J. Zirkel, A. Cecil, F. Schäfer [...]

Bioinformatics and Biology Insights

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Research article

First published 2003-8

Topological Analysis of Metabolic Networks Based on Petri Net Theory

Ionela Zevedei-Oancea, Stefan Schuster

In Silico Biology

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Research article

First published 2015-02

Computing Smallest Intervention Strategies for Multiple Metabolic Networks in a Boolean Model

Wei Lu, Takeyuki Tamura, Jiangning Song [...]

Journal of Computational Biology

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Research article

First published 2023-06

Speeding Up the Structural Analysis of Metabolic Network Models Using the Fredman–Khachiyan Algorithm B

Nafiseh Sedaghat, Tamon Stephen, Leonid Chindelevitch

Journal of Computational Biology

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