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Research article

First published 2006-07

Designing an A* Algorithm for Calculating Edit Distance between Rooted-Unordered Trees

Yair Horesh, Ramit Mehr, Ron Unger

Journal of Computational Biology

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Research article

First published 2014-6

An algorithm to improve the performance of string matching

Abdallah A. Hlayel, Adnan Hnaif

Journal of Information Science

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Research article

First published 2020-03

PyGTED: Python Application for Computing Graph Traversal Edit Distance

Ali Ebrahimpour Boroojeny, Akash Shrestha, Ali Sharifi-zarchi [...]

Journal of Computational Biology

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Research article

First published 2012-09

Comparing Pedigree Graphs

Bonnie Kirkpatrick, Yakir Reshef, Hilary Finucane [...]

Journal of Computational Biology

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Research article

First published 2022-11

Algorithms for Colinear Chaining with Overlaps and Gap Costs

Chirag Jain, Daniel Gibney, Sharma V. Thankachan

Journal of Computational Biology

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Research article

First published 2002-04

A General Edit Distance between RNA Structures

Tao Jiang, Guohui Lin, Bin Ma [...]

Journal of Computational Biology

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Research article

First published 2012-10

A Clique-Based Method Using Dynamic Programming for Computing Edit Distance Between Unordered Trees

Tomoya Mori, Takeyuki Tamura, Daiji Fukagawa [...]

Journal of Computational Biology

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Research article

First published 2010-7

Computing Maximal Error-detecting Capabilities and Distances of Regular Languages

Stavros Konstantinidis, Pedro V. Silva

Fundamenta Informaticae

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Research article

First published 2015-05

An Exact Algorithm to Compute the Double-Cut-and-Join Distance for Genomes with Duplicate Genes

Mingfu Shao, Yu Lin, Bernard M.E. Moret

Journal of Computational Biology

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Research article

First published 2011-01

Computing Atom Mappings for Biochemical Reactions without Subgraph Isomorphism

Markus Heinonen, Sampsa Lappalainen, Taneli Mielikäinen [...]

Journal of Computational Biology

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