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Research article

First published 2006-7

The Weighted Suffix Tree: An Efficient Data Structure for Handling Molecular Weighted Sequences and its Applications

Costas S. Iliopoulos, Christos Makris, Yannis Panagis [...]

Fundamenta Informaticae

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Research article

First published 2000-08

Algorithms for Extracting Structured Motifs Using a Suffix Tree with an Application to Promoter and Regulatory Site Consensus Identification

Laurent Marsan, Marie-France Sagot

Journal of Computational Biology

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Research article

First published 2014-04

Parallel Continuous Flow: A Parallel Suffix Tree Construction Tool for Whole Genomes

Matteo Comin, Montse Farreras

Journal of Computational Biology

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Research article

First published

Space Efficient Computation of Rare Maximal Exact Matches between Multiple Sequences

Enno Ohlebusch, Stefan Kurtz

Journal of Computational Biology

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Research article

First published 2003-04

Protein Family Classification Using Sparse Markov Transducers

Eleazar Eskin, William Stafford Noble, Yoram Singer

Journal of Computational Biology

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Research article

First published 2017-12

Multiple Sequence Alignment Based on a Suffix Tree and Center-Star Strategy: A Linear Method for Multiple Nucleotide Sequence Alignment on Spark Parallel Framework

Wenhe Su, Xiangke Liao, Yutong Lu [...]

Journal of Computational Biology

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Research article

First published 2014-10

Detecting hot topics from Twitter: A multiview approach

Yixiang Fang, Haijun Zhang, Yunming Ye [...]

Journal of Information Science

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Research article

First published 2000-02

Efficient Detection of Unusual Words

Alberto Apostolico, Mary Ellen Bock, Stefano Lonardi [...]

Journal of Computational Biology

Free access

Research article

First published 2002-8

Construction of Stochastic Context Trees for Genetic Texts

Yuri L. Orlov, Vladimir P. Filippov, Vladimir N. Potapov [...]

In Silico Biology

Open access

Review article

First published 2013

TIRfinder: A Web Tool for Mining Class II Transposons Carrying Terminal Inverted Repeats

Tomasz Gambin, Michał Startek, Krzysztof Walczak [...]

Evolutionary Bioinformatics

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