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Articles (92)

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1-10 of 92 results for RNA folding prediction

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Select article: Novel and Efficient RNA Secondary Structure Prediction Using Hierarchical Folding

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Novel and Efficient RNA Secondary Structure Prediction Using Hierarchical Folding

Hosna Jabbari, Anne Condon, Shelly Zhao

Journal of Computational Biology

Select article: Consensus Folding of Unaligned RNA Sequences Revisited

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First published 2006-03

Consensus Folding of Unaligned RNA Sequences Revisited

Vineet Bafna, Haixu Tang, Shaojie Zhang

Journal of Computational Biology

Select article: A Method for Prediction of Accessible Sites on an mRNA Sequence for Target Selection of Hammerhead Ribozymes

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First published 2002-08

A Method for Prediction of Accessible Sites on an mRNA Sequence for Target Selection of Hammerhead Ribozymes

Alberto Mercatanti, Giuseppe Rainaldi, Laura Mariani [...]

Journal of Computational Biology

Select article: Spectral Decomposition for the Search and Analysis of RNA Secondary Structure

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Research article

First published 2004-12

Spectral Decomposition for the Search and Analysis of RNA Secondary Structure

Danny Barash

Journal of Computational Biology

Select article: Cotranscriptional Kinetic Folding of RNA Secondary Structures Including Pseudoknots

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Research article

First published 2021-09

Cotranscriptional Kinetic Folding of RNA Secondary Structures Including Pseudoknots

Vo Hong Thanh, Dani Korpela, Pekka Orponen

Journal of Computational Biology

Select article: $STR^{2}$ : A Structure to String Approach for Locating G-Box Riboswitch Shapes in Pre-Selected Genes

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Research article

First published 2004-11

$STR^{2}$ : A Structure to String Approach for Locating G-Box Riboswitch Shapes in Pre-Selected Genes

Oriel Bergig, Danny Barash, Evgeny Nudler [...]

In Silico Biology

Select article: Computer-Aided Search for Effective Antisense RNA Target Sequences of the Human Immunodeficiency Virus Type 1

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Research article

First published 1993-3

Computer-Aided Search for Effective Antisense RNA Target Sequences of the Human Immunodeficiency Virus Type 1

Georg Sczakiel, Matthias Homann, Karola Rittner

Nucleic Acid Therapeutics

Select article: An Efficient Algorithm for Upper Bound on the Partition Function of Nucleic Acids

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Research article

First published 2013-07

An Efficient Algorithm for Upper Bound on the Partition Function of Nucleic Acids

Hamidreza Chitsaz, Elmirasadat Forouzmand, Gholamreza Haffari

Journal of Computational Biology

Select article: Rich Parameterization Improves RNA Structure Prediction

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Research article

First published 2011-11

Rich Parameterization Improves RNA Structure Prediction

Shay Zakov, Yoav Goldberg, Michael Elhadad [...]

Journal of Computational Biology

Select article: Simultaneous Folding of Alternative RNA Structures with Mutual Constraints: An Application to Next-Generation Sequencing-based RNA Structure Probing

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Research article

First published 2014-08

Simultaneous Folding of Alternative RNA Structures with Mutual Constraints: An Application to Next-Generation Sequencing-based RNA Structure Probing

Cuncong Zhong, Shaojie Zhang

Journal of Computational Biology

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