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Research article

First published 2004-03

An Integrated Probabilistic Model for Functional Prediction of Proteins

Minghua Deng, Ting Chen, Fengzhu Sun

Journal of Computational Biology

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Research article

First published 2011-11

Selecting different protein representations and classification algorithms in hierarchical protein function prediction

Carlos N. Silla, Alex A. Freitas

Intelligent Data Analysis: An International Journal

Open access

Research article

First published 2021

The Power of Universal Contextualized Protein Embeddings in Cross-species Protein Function Prediction

Irene van den Bent, Stavros Makrodimitris, Marcel Reinders

Evolutionary Bioinformatics

Free access

Research article

First published 2009-2

A Naive Bayes Classifier for Protein Function Prediction

Jukka Kohonen, Sarish Talikota, Jukka Corander [...]

In Silico Biology

Open access

Review article

First published 2007

Prediction of Functional Class of Proteins and Peptides Irrespective of Sequence Homology by Support Vector Machines

Zhi Qun Tang, Hong Huang Lin, Hai Lei Zhang [...]

Bioinformatics and Biology Insights

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Research article

First published

The MASH Pipeline for Protein Function Prediction and an Algorithm for the Geometric Refinement of 3D Motifs

Brian Y. Chen, Viacheslav Y. Fofanov, Drew H. Bryant [...]

Journal of Computational Biology

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Research article

First published 2015-8

Immunological Computation for Protein Function Prediction

Meriem Zekri, Karima Alem, Labiba Souici-Meslati

Fundamenta Informaticae

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Research article

First published 2025

Deep learning-based integrated framework for protein structure prediction and functional annotation

Minghao Zhang

Journal of Computational Methods in Sciences and Engineering

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Research article

First published 2003-12

Prediction of Protein Function Using Protein–Protein Interaction Data

Minghua Deng, Kui Zhang, Shipra Mehta [...]

Journal of Computational Biology

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Research article

First published 2014-12

A New Protein Structure Representation for Efficient Protein Function Prediction

Huda A. Maghawry, Mostafa G.M. Mostafa, Tarek F. Gharib

Journal of Computational Biology

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