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Research article

First published 2004-8

Constructing Biological Pathway Models with Hybrid Functional Petri Nets

Atsushi Doi, Sachie Fujita, Hiroshi Matsuno [...]

In Silico Biology

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Research article

First published 2006-2

Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri Net

Atsushi Doi, Masao Nagasaki, Hiroshi Matsuno [...]

In Silico Biology

Free access

Research article

First published 2003-8

Biopathways Representation and Simulation on Hybrid Functional Petri Net

Hiroshi Matsuno, Yukiko Tanaka, Hitoshi Aoshima [...]

In Silico Biology

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Research article

First published 2003-8

Quantitative Petri Net Model of Gene Regulated Metabolic Networks in the Cell

Ming Chen, Ralf Hofestädt

In Silico Biology

Retricted access

Research article

First published 2025-11

Using Partition Information Entropy to Computationally Rank Order Critical Subreactions in a Petri Net Model of a Biochemical Signaling Network

Janet B. Jones-Oliveira, Hans-Joseph B. Oliveira, Joseph S. Oliveira [...]

Journal of Computational Biology

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Research article

First published 2010-2

Impact of Delays and Noise on Dopamine Signal Transduction

Jialiang Wu, Zhen Qi, Eberhard O. Voit

In Silico Biology

Retricted access

Research article

First published 2018

A Hybrid Petri Net Model of the Akt-Wnt-mTOR-p70S6K Signalling Network in Neurons

Mathieu Pagé Fortin, Simon V. Hardy

Fundamenta Informaticae

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Research article

First published 2007-12

Cell System Ontology: Representation for Modeling,Visualizing,and Simulating Biological Pathways

Euna Jeong, Masao Nagasaki, Ayumu Saito [...]

In Silico Biology

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