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Research article

First published 1997-10

Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model

Richa Agarwala, Serafim Batzoglou, Vlado DANČÍK [...]

Journal of Computational Biology

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Research article

First published 1997-10

Lattice and Off-Lattice Side Chain Models of Protein Folding: Linear Time Structure Prediction Better than 86% of Optimal

William E. Hart, Sorin Istrail

Journal of Computational Biology

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Research article

First published 1998-3

Protein Folding in the Hydrophobic-Hydrophilic ( HP ) Model is NP-Complete

Bonnie Berger, Tom Leighton

Journal of Computational Biology

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Research article

First published 2018

Approximation Algorithms for Three Dimensional Protein Folding

Dipan Lal Shaw, A.S.M. Shohidull Islam, Shuvasish Karmaker [...]

Fundamenta Informaticae

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Research article

First published

Extended HP Model for Protein Structure Prediction

Tamjidul Hoque, Madhu Chetty, Abdul Sattar

Journal of Computational Biology

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Research article

First published 2013-08

An Effective Exact Algorithm and a New Upper Bound for the Number of Contacts in the Hydrophobic-Polar Two-Dimensional Lattice Model

Emanuele Giaquinta, Laura Pozzi

Journal of Computational Biology

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Research article

First published

Stable Structure-Approximating Inverse Protein Folding in 2D Hydrophobic-Polar-Cysteine (HPC) Model

Alireza Hadj Khodabakhshi, Ján Maňuch, Arash Rafiey [...]

Journal of Computational Biology

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Research article

First published 2009-06

Inverse Protein Folding in 3D Hexagonal Prism Lattice under HPC Model

Alireza Hadj Khodabakhshi, Ján Maňuch, Arash Rafiey [...]

Journal of Computational Biology

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Research article

First published 2017-05

Protein Folding Prediction in a Cubic Lattice in Hydrophobic-Polar Model

Nicola Yanev, Metodi Traykov, Peter Milanov [...]

Journal of Computational Biology

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Research article

First published 2006-01

A Grammatical Theory for the Conformational Changes of Simple Helix Bundles

David Chiang, Aravind K. Joshi, Ken A. Dill

Journal of Computational Biology

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