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Research article

First published 2021-7

GPU-accelerated molecular dynamics: State-of-art software performance and porting from Nvidia CUDA to AMD HIP

Nikolay Kondratyuk, Vsevolod Nikolskiy, Daniil Pavlov [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2024-9

Visualization at exascale: Making it all work with VTK-m

Kenneth Moreland, Tushar M Athawale, Vicente Bolea [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2016-5

Software pipelining for graphic processing unit acceleration: Partition,scheduling and granularity

Bozhong Liu, Weidong Qiu, Lin Jiang [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2019-5

Angara interconnect makes GPU-based Desmos supercomputer an efficient tool for molecular dynamics calculations

Vladimir Stegailov, Ekaterina Dlinnova, Timur Ismagilov [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2022-3

Development of a hardware-accelerated simulation kernel for ultra-high vacuum with Nvidia RTX GPUs

Pascal R Bähr, Bruno Lang, Peer Ueberholz [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2018-08

FaST-LMM for Two-Way Epistasis Tests on High-Performance Clusters

Héctor Martínez, Sergio Barrachina, Maribel Castillo [...]

Journal of Computational Biology

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Research article

First published 2025-1

Evolution of the SLATE linear algebra library

Mark Gates, Ahmad Abdelfattah, Kadir Akbudak [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2019-9

A GPU acceleration of 3-D Fourier reconstruction in cryo-EM

David Střelák, Carlos Óscar S Sorzano, José María Carazo [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2018-3

MrBayes sMC 3

Lídia Kuan, Frederico Pratas, Leonel Sousa [...]

The International Journal of High Performance Computing Applications

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Research article

First published 2025-1

A graphics processing unit accelerated sparse direct solver and preconditioner with block low rank compression

Lisa Claus, Pieter Ghysels, Wajih Halim Boukaram [...]

The International Journal of High Performance Computing Applications

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