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Research article

First published 2017-8-9

On Fixed Points of the Burrows-Wheeler Transform

Sabrina Mantaci, Antonio Restivo, Giovanna Rosone [...]

Fundamenta Informaticae

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Research article

First published 2005-05

Space-Efficient Whole Genome Comparisons with Burrows–Wheeler Transforms

Ross A. Lippert

Journal of Computational Biology

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Research article

First published 2019-09

Multithread Multistring Burrows–Wheeler Transform and Longest Common Prefix Array

Paola Bonizzoni, Gianluca Della Vedova, Yuri Pirola [...]

Journal of Computational Biology

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Research article

First published 2005-09

A Space-Efficient Construction of the Burrows–Wheeler Transform for Genomic Data

Ross A. Lippert, Clark M. Mobarry, Brian P. Walenz

Journal of Computational Biology

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Research article

First published 2007-02

Lossless and Near-Lossless Compression of Ecg Signals with Block-Sorting Techniques

Ziya Arnavut

The International Journal of High Performance Computing Applications

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Research article

First published 2017-10

FSG: Fast String Graph Construction for De Novo Assembly

Paola Bonizzoni, Gianluca Della Vedova, Yuri Pirola [...]

Journal of Computational Biology

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Research article

First published 2022-02

Finding Maximal Exact Matches Using the r-Index

Massimiliano Rossi, Marco Oliva, Paola Bonizzoni [...]

Journal of Computational Biology

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Research article

First published 2009-11

Computation of Rank and Select Functions on Hierarchical Binary String and Its Application to Genome Mapping Problems for Short-Read DNA Sequences

Kouichi Kimura, Yutaka Suzuki, Sumio Sugano [...]

Journal of Computational Biology

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Research article

First published 2025-09

Effloc: An Efficient Locating Algorithm for Mass-Occurrence Biological Patterns with FM-Index

Li-Lu Guo

Journal of Computational Biology

Open access

Research article

First published 2020-04

Efficient Construction of a Complete Index for Pan-Genomics Read Alignment

Alan Kuhnle, Taher Mun, Christina Boucher [...]

Journal of Computational Biology

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